RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
CDH1-213ENST00000612417 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
CDH1-213ENST00000612417 TSPY26PQ9H489 355 aa17.55■□□□□ 0.4
CDH1-213ENST00000612417 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
CDH1-213ENST00000612417 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 F13A1P00488 732 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 KCNQ4P56696 695 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 LARGE1O95461 756 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 NLRP10Q86W26 655 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 GDPD2Q9HCC8 539 aa17.54■□□□□ 0.4
CDH1-213ENST00000612417 RBM8AQ9Y5S9 174 aaKnown RBP17.54■□□□□ 0.4
CDH1-213ENST00000612417 BTAF1O14981 1849 aa17.53■□□□□ 0.4
CDH1-213ENST00000612417 PCCAP05165 728 aaPredicted RBP17.53■□□□□ 0.4
CDH1-213ENST00000612417 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
CDH1-213ENST00000612417 CPA1P15085 419 aa17.53■□□□□ 0.4
CDH1-213ENST00000612417 NMIQ13287 307 aaPredicted RBP17.53■□□□□ 0.4
CDH1-213ENST00000612417 CREB3L3Q68CJ9 461 aa17.53■□□□□ 0.4
CDH1-213ENST00000612417 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
CDH1-213ENST00000612417 ONECUT3O60422 494 aaPredicted RBP17.52■□□□□ 0.4
CDH1-213ENST00000612417 FAM227BQ96M60 508 aa17.52■□□□□ 0.4
CDH1-213ENST00000612417 CCDC8Q9H0W5 538 aaPredicted RBP17.52■□□□□ 0.4
CDH1-213ENST00000612417 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
CDH1-213ENST00000612417 UBE2HP62256 183 aa17.52■□□□□ 0.39
CDH1-213ENST00000612417 LINC00116Q8NCU8 138 aa17.52■□□□□ 0.39
CDH1-213ENST00000612417 CNPY2Q9Y2B0 182 aa17.52■□□□□ 0.39
CDH1-213ENST00000612417 PSMA5P28066 241 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 CCDC183Q5T5S1 534 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
CDH1-213ENST00000612417 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
CDH1-213ENST00000612417 RFX7Q2KHR2 1363 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 NHSQ6T4R5 1651 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 SLC27A2O14975 620 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 GJB2P29033 226 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 MCM5P33992 734 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
CDH1-213ENST00000612417 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
CDH1-213ENST00000612417 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
CDH1-213ENST00000612417 MTMR6Q9Y217 621 aa17.51■□□□□ 0.39
CDH1-213ENST00000612417 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
CDH1-213ENST00000612417 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
CDH1-213ENST00000612417 LETM1O95202 739 aaPredicted RBP17.5■□□□□ 0.39
CDH1-213ENST00000612417 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
CDH1-213ENST00000612417 TSGA10IPQ3SY00 556 aa17.5■□□□□ 0.39
CDH1-213ENST00000612417 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
CDH1-213ENST00000612417 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
CDH1-213ENST00000612417 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
CDH1-213ENST00000612417 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CDH1-213ENST00000612417 COL5A3P25940 1745 aaPredicted RBP17.49■□□□□ 0.39
CDH1-213ENST00000612417 TFCP2Q12800 502 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 ME3Q16798 604 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 RREB1Q92766 1687 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 OFD1O75665 1012 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
CDH1-213ENST00000612417 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
CDH1-213ENST00000612417 SBF2Q86WG5 1849 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 ATP5JP18859 108 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 KCNJ4P48050 445 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 UVSSAQ2YD98 709 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
CDH1-213ENST00000612417 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
CDH1-213ENST00000612417 ZKSCAN5Q9Y2L8 839 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
CDH1-213ENST00000612417 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 TPCN1Q9ULQ1 816 aa17.48■□□□□ 0.39
CDH1-213ENST00000612417 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 TAF7LQ5H9L4 462 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 USPL1Q5W0Q7 1092 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
CDH1-213ENST00000612417 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
CDH1-213ENST00000612417 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
CDH1-213ENST00000612417 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
CDH1-213ENST00000612417 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
CDH1-213ENST00000612417 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
CDH1-213ENST00000612417 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
CDH1-213ENST00000612417 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
CDH1-213ENST00000612417 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
CDH1-213ENST00000612417 MYH3P11055 1940 aa17.46■□□□□ 0.38
CDH1-213ENST00000612417 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
CDH1-213ENST00000612417 EYA2O00167 538 aa17.45■□□□□ 0.38
CDH1-213ENST00000612417 TERF1P54274 439 aa17.45■□□□□ 0.38
CDH1-213ENST00000612417 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms