RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 TMX3Q96JJ7 454 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 ALS2CR12Q96Q35 445 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
SMAD6-205ENST00000612349 ANKRD2Q9GZV1 360 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 MAP3K19Q56UN5 1328 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 PHACTR3Q96KR7 559 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 PAG1Q9NWQ8 432 aa23.86■■□□□ 1.41
SMAD6-205ENST00000612349 PCDH11XQ9BZA7 1347 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 PCDH11YQ9BZA8 1340 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 BIN1O00499 593 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 ZSCAN22P10073 491 aaPredicted RBP23.85■■□□□ 1.41
SMAD6-205ENST00000612349 IP6K1Q92551 441 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.85■■□□□ 1.41
SMAD6-205ENST00000612349 LIG1P18858 919 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 CPLX3Q8WVH0 158 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 PANK2Q9BZ23 570 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 CCDC172P0C7W6 258 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 CCDC174Q6PII3 467 aa23.85■■□□□ 1.41
SMAD6-205ENST00000612349 GSTTP1A0A1W2PQM5 241 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 VAMP4O75379 141 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 SYKP43405 635 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 EXOC1Q9NV70 894 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 ARHGEF12Q9NZN5 1544 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 HOOK3Q86VS8 718 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 EYA3Q99504 573 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 USP25Q9UHP3 1055 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 UVSSAQ2YD98 709 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 CCDC91Q7Z6B0 441 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 GDPD2Q9HCC8 539 aa23.84■■□□□ 1.41
SMAD6-205ENST00000612349 IQSEC3Q9UPP2 1182 aaPredicted RBP23.84■■□□□ 1.41
SMAD6-205ENST00000612349 IRS4O14654 1257 aaPredicted RBP23.84■■□□□ 1.41
SMAD6-205ENST00000612349 NAA15Q9BXJ9 866 aaKnown RBP23.84■■□□□ 1.41
SMAD6-205ENST00000612349 MAGEB6P1A0A0J9YX57 407 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 RAB11FIP4Q86YS3 637 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 B4DLN1 442 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 MYCNP04198 464 aaPredicted RBP23.83■■□□□ 1.41
SMAD6-205ENST00000612349 HOXC9P31274 260 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 MRPL12P52815 198 aaKnown RBP23.83■■□□□ 1.41
SMAD6-205ENST00000612349 TAF3Q5VWG9 929 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 TMEM87AQ8NBN3 555 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 TAOK3Q9H2K8 898 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 PIK3C2GO75747 1445 aa23.83■■□□□ 1.41
SMAD6-205ENST00000612349 FERMT2Q96AC1 680 aa23.83■■□□□ 1.4
SMAD6-205ENST00000612349 CALML3P27482 149 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 TSPYL6Q8N831 410 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 PARP3Q9Y6F1 533 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 SPAG1Q07617 926 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 USP8P40818 1118 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 KLHL40Q2TBA0 621 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 TRIM47Q96LD4 638 aa23.82■■□□□ 1.4
SMAD6-205ENST00000612349 SLC4A8Q2Y0W8 1093 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 BABAM1Q9NWV8 329 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 RNF113AO15541 343 aaKnown RBP23.81■■□□□ 1.4
SMAD6-205ENST00000612349 CTNNA2P26232 953 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 TMC6Q7Z403 805 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 PRC1O43663 620 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 POLD1P28340 1107 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 NBPF14Q5TI25 921 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 TFCP2L1Q9NZI6 479 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 RTL9Q8NET4 1388 aa23.81■■□□□ 1.4
SMAD6-205ENST00000612349 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 DCTPP1Q9H773 170 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 DDX21Q9NR30 783 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 KRT24Q2M2I5 525 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 CTNNBL1Q8WYA6 563 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 C6orf50Q9HD87 102 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 NSFL1CQ9UNZ2 370 aaKnown RBP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 F8W031 263 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 RNMTO43148 476 aaKnown RBP23.8■■□□□ 1.4
SMAD6-205ENST00000612349 NF2P35240 595 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 PZPP20742 1482 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 N4BP3O15049 544 aa23.8■■□□□ 1.4
SMAD6-205ENST00000612349 MACROD2A1Z1Q3 448 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 NECAB1Q8N987 351 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 DYDC1Q8WWB3 177 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 JDP2Q8WYK2 163 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 HEATR3Q7Z4Q2 680 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
SMAD6-205ENST00000612349 TRMT1LQ7Z2T5 733 aaKnown RBP23.79■■□□□ 1.4
SMAD6-205ENST00000612349 RAD50Q92878 1312 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 STAT6P42226 847 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 NAPAP54920 295 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 IFI16Q16666 785 aaKnown RBP23.78■■□□□ 1.4
SMAD6-205ENST00000612349 EHBP1Q8NDI1 1231 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 CTAGE1Q96RT6 745 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 POTEB2H3BUK9 544 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 Q6ZUG5 572 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 ATP10AO60312 1499 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 SMARCC2Q8TAQ2 1214 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 BICD1Q96G01 975 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 IFFO1Q0D2I5 559 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 PICALMQ13492 652 aa23.78■■□□□ 1.4
SMAD6-205ENST00000612349 MRPS27Q92552 414 aaKnown RBP23.78■■□□□ 1.4
SMAD6-205ENST00000612349 GTPBP4Q9BZE4 634 aaKnown RBP23.78■■□□□ 1.4
SMAD6-205ENST00000612349 FERMT1Q9BQL6 677 aa23.77■■□□□ 1.4
SMAD6-205ENST00000612349 PA2G4Q9UQ80 394 aaKnown RBP23.77■■□□□ 1.4
SMAD6-205ENST00000612349 TMCO5BA8MYB1 307 aa23.77■■□□□ 1.4
SMAD6-205ENST00000612349 NMIQ13287 307 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms