RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 EYA3Q99504 573 aa21.68■■□□□ 1.06
TVP23A-210ENST00000612195 MYD88Q99836 296 aa21.68■■□□□ 1.06
TVP23A-210ENST00000612195 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
TVP23A-210ENST00000612195 POLR2AP24928 1970 aaKnown RBP21.67■■□□□ 1.06
TVP23A-210ENST00000612195 RTL9Q8NET4 1388 aa21.67■■□□□ 1.06
TVP23A-210ENST00000612195 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
TVP23A-210ENST00000612195 RBM26Q5T8P6 1007 aaKnown RBP21.66■■□□□ 1.06
TVP23A-210ENST00000612195 C8orf58Q8NAV2 365 aa21.66■■□□□ 1.06
TVP23A-210ENST00000612195 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
TVP23A-210ENST00000612195 CALD1Q05682 793 aaKnown RBP21.65■■□□□ 1.06
TVP23A-210ENST00000612195 JARID2Q92833 1246 aaPredicted RBP21.65■■□□□ 1.06
TVP23A-210ENST00000612195 ZC3H12CQ9C0D7 883 aaKnown RBP21.65■■□□□ 1.06
TVP23A-210ENST00000612195 PODXL2Q9NZ53 605 aa21.65■■□□□ 1.06
TVP23A-210ENST00000612195 HUNKP57058 714 aa21.64■■□□□ 1.05
TVP23A-210ENST00000612195 KRT26Q7Z3Y9 468 aa21.64■■□□□ 1.05
TVP23A-210ENST00000612195 CCDC191Q8NCU4 936 aa21.64■■□□□ 1.05
TVP23A-210ENST00000612195 ANKIB1Q9P2G1 1089 aa21.64■■□□□ 1.05
TVP23A-210ENST00000612195 SCN9AQ15858 1988 aa21.64■■□□□ 1.05
TVP23A-210ENST00000612195 UFL1O94874 794 aa21.63■■□□□ 1.05
TVP23A-210ENST00000612195 PCCAP05165 728 aaPredicted RBP21.63■■□□□ 1.05
TVP23A-210ENST00000612195 BRPF1P55201 1214 aaPredicted RBP21.63■■□□□ 1.05
TVP23A-210ENST00000612195 CCDC152Q4G0S7 254 aa21.63■■□□□ 1.05
TVP23A-210ENST00000612195 CCDC85AQ96PX6 553 aaPredicted RBP21.63■■□□□ 1.05
TVP23A-210ENST00000612195 CWC25Q9NXE8 425 aaPredicted RBP21.63■■□□□ 1.05
TVP23A-210ENST00000612195 CA12O43570 354 aa21.62■■□□□ 1.05
TVP23A-210ENST00000612195 PDE8AO60658 829 aa21.62■■□□□ 1.05
TVP23A-210ENST00000612195 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
TVP23A-210ENST00000612195 DCPSQ96C86 337 aaKnown RBP21.62■■□□□ 1.05
TVP23A-210ENST00000612195 ZIC5Q96T25 663 aa21.62■■□□□ 1.05
TVP23A-210ENST00000612195 METTL22Q9BUU2 404 aaPredicted RBP21.62■■□□□ 1.05
TVP23A-210ENST00000612195 GGA1Q9UJY5 639 aa21.62■■□□□ 1.05
TVP23A-210ENST00000612195 ADM5C9JUS6 153 aa21.61■■□□□ 1.05
TVP23A-210ENST00000612195 G3V3G9 751 aa21.61■■□□□ 1.05
TVP23A-210ENST00000612195 DCAF8Q5TAQ9 597 aa21.61■■□□□ 1.05
TVP23A-210ENST00000612195 CASP8AP2Q9UKL3 1982 aa21.6■■□□□ 1.05
TVP23A-210ENST00000612195 DDX58O95786 925 aaKnown RBP21.6■■□□□ 1.05
TVP23A-210ENST00000612195 NOGQ13253 232 aa21.6■■□□□ 1.05
TVP23A-210ENST00000612195 CCDC30Q5VVM6 783 aa21.6■■□□□ 1.05
TVP23A-210ENST00000612195 KIF4BQ2VIQ3 1234 aa21.59■■□□□ 1.05
TVP23A-210ENST00000612195 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
TVP23A-210ENST00000612195 GBA2Q9HCG7 927 aaPredicted RBP21.59■■□□□ 1.05
TVP23A-210ENST00000612195 MAP3K2Q9Y2U5 619 aa21.59■■□□□ 1.05
TVP23A-210ENST00000612195 CCDC85CA6NKD9 419 aa21.58■■□□□ 1.05
TVP23A-210ENST00000612195 RGMBQ6NW40 437 aa21.58■■□□□ 1.05
TVP23A-210ENST00000612195 C2orf69Q8N8R5 385 aa21.58■■□□□ 1.05
TVP23A-210ENST00000612195 ASTN2O75129 1339 aaPredicted RBP21.57■■□□□ 1.04
TVP23A-210ENST00000612195 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
TVP23A-210ENST00000612195 CHMP4AQ9BY43 222 aa21.57■■□□□ 1.04
TVP23A-210ENST00000612195 XDHP47989 1333 aa21.56■■□□□ 1.04
TVP23A-210ENST00000612195 FAM155AB1AL88 458 aaPredicted RBP21.56■■□□□ 1.04
TVP23A-210ENST00000612195 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
TVP23A-210ENST00000612195 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
TVP23A-210ENST00000612195 SULF1Q8IWU6 871 aa21.56■■□□□ 1.04
TVP23A-210ENST00000612195 GGA3Q9NZ52 723 aa21.56■■□□□ 1.04
TVP23A-210ENST00000612195 PI4KAP2A4QPH2 592 aa21.55■■□□□ 1.04
TVP23A-210ENST00000612195 IGKV5-2P06315 115 aa21.55■■□□□ 1.04
TVP23A-210ENST00000612195 ZNF280AP59817 542 aaPredicted RBP21.55■■□□□ 1.04
TVP23A-210ENST00000612195 PI4KAP1Q8N8J0 262 aa21.55■■□□□ 1.04
TVP23A-210ENST00000612195 AGBL3Q8NEM8 1001 aa21.55■■□□□ 1.04
TVP23A-210ENST00000612195 WTIPA6NIX2 430 aaPredicted RBP21.54■■□□□ 1.04
TVP23A-210ENST00000612195 ZNF157P51786 506 aaPredicted RBP21.54■■□□□ 1.04
TVP23A-210ENST00000612195 SCARF1Q14162 830 aa21.54■■□□□ 1.04
TVP23A-210ENST00000612195 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
TVP23A-210ENST00000612195 CCDC102AQ96A19 550 aa21.54■■□□□ 1.04
TVP23A-210ENST00000612195 MCOLN1Q9GZU1 580 aa21.54■■□□□ 1.04
TVP23A-210ENST00000612195 PSME4Q14997 1843 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 ATP2B4P23634 1241 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 CTSWP56202 376 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 ANGEL2Q5VTE6 544 aaKnown RBP21.53■■□□□ 1.04
TVP23A-210ENST00000612195 TTLL11Q8NHH1 800 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 CDCA5Q96FF9 252 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 GMLQ99445 158 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 ZNF609O15014 1411 aa21.53■■□□□ 1.04
TVP23A-210ENST00000612195 KIF23Q02241 960 aaPredicted RBP21.52■■□□□ 1.04
TVP23A-210ENST00000612195 PODNQ7Z5L7 613 aa21.52■■□□□ 1.04
TVP23A-210ENST00000612195 CDC5LQ99459 802 aaKnown RBP21.52■■□□□ 1.04
TVP23A-210ENST00000612195 GREM2Q9H772 168 aa21.52■■□□□ 1.04
TVP23A-210ENST00000612195 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 USP17L8P0C7I0 530 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 NEXNQ0ZGT2 675 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 CWF19L2Q2TBE0 894 aaKnown RBP21.51■■□□□ 1.03
TVP23A-210ENST00000612195 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 MYOZ2Q9NPC6 264 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
TVP23A-210ENST00000612195 DGKZQ13574 1117 aa21.5■■□□□ 1.03
TVP23A-210ENST00000612195 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
TVP23A-210ENST00000612195 G2E3Q7L622 706 aa21.5■■□□□ 1.03
TVP23A-210ENST00000612195 BSDC1Q9NW68 430 aaPredicted RBP21.5■■□□□ 1.03
TVP23A-210ENST00000612195 MYH3P11055 1940 aa21.5■■□□□ 1.03
TVP23A-210ENST00000612195 SPEF2Q9C093 1822 aa21.5■■□□□ 1.03
TVP23A-210ENST00000612195 NEURL1BA8MQ27 555 aa21.49■■□□□ 1.03
TVP23A-210ENST00000612195 SLC10A3P09131 477 aa21.48■■□□□ 1.03
TVP23A-210ENST00000612195 RGS19P49795 217 aa21.48■■□□□ 1.03
TVP23A-210ENST00000612195 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
TVP23A-210ENST00000612195 SAGE1Q9NXZ1 904 aa21.48■■□□□ 1.03
TVP23A-210ENST00000612195 SCAF8Q9UPN6 1271 aaKnown RBP21.48■■□□□ 1.03
TVP23A-210ENST00000612195 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms