RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 KAZALD1Q96I82 304 aa11.02□□□□□ -0.64
SMAD4-217ENST00000611848 TNNQ9UQP3 1299 aa11.02□□□□□ -0.64
SMAD4-217ENST00000611848 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.64
SMAD4-217ENST00000611848 SNED1Q8TER0 1413 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 LRRC37AA6NMS7 1700 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 GNAI3P08754 354 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 AAMPQ13685 434 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-217ENST00000611848 C9orf131Q5VYM1 1079 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 MPNDQ8N594 471 aa11.02□□□□□ -0.65
SMAD4-217ENST00000611848 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
SMAD4-217ENST00000611848 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-217ENST00000611848 DPP8Q6V1X1 898 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-217ENST00000611848 SUPT20HQ8NEM7 779 aa11.01□□□□□ -0.65
SMAD4-217ENST00000611848 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
SMAD4-217ENST00000611848 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
SMAD4-217ENST00000611848 RNF181Q9P0P0 153 aa11.01□□□□□ -0.65
SMAD4-217ENST00000611848 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
SMAD4-217ENST00000611848 COL4A1P02462 1669 aa11□□□□□ -0.65
SMAD4-217ENST00000611848 ANKRD44Q8N8A2 993 aa11□□□□□ -0.65
SMAD4-217ENST00000611848 MEIS3Q99687 375 aa11□□□□□ -0.65
SMAD4-217ENST00000611848 RTFDC1Q9BY42 306 aaPredicted RBP11□□□□□ -0.65
SMAD4-217ENST00000611848 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
SMAD4-217ENST00000611848 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SMAD4-217ENST00000611848 SPEF2Q9C093 1822 aa11□□□□□ -0.65
SMAD4-217ENST00000611848 RLBP1P12271 317 aa10.99□□□□□ -0.65
SMAD4-217ENST00000611848 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
SMAD4-217ENST00000611848 PRELPP51888 382 aa10.99□□□□□ -0.65
SMAD4-217ENST00000611848 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
SMAD4-217ENST00000611848 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
SMAD4-217ENST00000611848 ZNF277Q9NRM2 450 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-217ENST00000611848 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
SMAD4-217ENST00000611848 PDE4AP27815 886 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 SLC51AQ86UW1 340 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 PANK1Q8TE04 598 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 BACH2Q9BYV9 841 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 MINPP1Q9UNW1 487 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 LRRFIP2Q9Y608 721 aaKnown RBP10.98□□□□□ -0.65
SMAD4-217ENST00000611848 XDHP47989 1333 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 GNAI2P04899 355 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 GPSM2P81274 684 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 JDP2Q8WYK2 163 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 EYA3Q99504 573 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 ANKRD2Q9GZV1 360 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 GGA1Q9UJY5 639 aa10.98□□□□□ -0.65
SMAD4-217ENST00000611848 LTBP1Q14766 1721 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-217ENST00000611848 PPIP5K2O43314 1243 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 LDHAL6AQ6ZMR3 332 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 TBC1D16Q8TBP0 767 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
SMAD4-217ENST00000611848 COG6Q9Y2V7 657 aa10.97□□□□□ -0.65
SMAD4-217ENST00000611848 UFL1O94874 794 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 CHRNDQ07001 517 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 KIAA2012Q0VF49 1180 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 MTX1Q13505 466 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 MVPQ14764 893 aaKnown RBP10.96□□□□□ -0.65
SMAD4-217ENST00000611848 WASHC4Q2M389 1173 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 ZNF594Q96JF6 807 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-217ENST00000611848 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 POLLQ9UGP5 575 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
SMAD4-217ENST00000611848 DUOX1Q9NRD9 1551 aa10.96□□□□□ -0.66
SMAD4-217ENST00000611848 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 NIM1KQ8IY84 436 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
SMAD4-217ENST00000611848 GLTPD2A6NH11 291 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 FZD9O00144 591 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 IGHDP01880 384 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 RFX5P48382 616 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-217ENST00000611848 AOC3Q16853 763 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 ZNF784Q8NCA9 323 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-217ENST00000611848 RIPOR2Q9Y4F9 1068 aa10.95□□□□□ -0.66
SMAD4-217ENST00000611848 MROH5Q6ZUA9 1318 aa10.94□□□□□ -0.66
SMAD4-217ENST00000611848 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
SMAD4-217ENST00000611848 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
SMAD4-217ENST00000611848 PTPN12Q05209 780 aaKnown RBP10.94□□□□□ -0.66
SMAD4-217ENST00000611848 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
SMAD4-217ENST00000611848 COPRSQ9NQ92 184 aa10.94□□□□□ -0.66
SMAD4-217ENST00000611848 A0A1B0GUL6 1792 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 EYA2O00167 538 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 ANP32AP39687 249 aaKnown RBP10.93□□□□□ -0.66
SMAD4-217ENST00000611848 KCNJ4P48050 445 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 KLHDC4Q8TBB5 520 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 PUS3Q9BZE2 481 aaKnown RBP10.93□□□□□ -0.66
SMAD4-217ENST00000611848 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
SMAD4-217ENST00000611848 COL4A5P29400 1685 aa10.92□□□□□ -0.66
SMAD4-217ENST00000611848 TAF5LO75529 589 aa10.92□□□□□ -0.66
SMAD4-217ENST00000611848 CIAO1O76071 339 aa10.92□□□□□ -0.66
SMAD4-217ENST00000611848 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms