RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 BSDC1Q9NW68 430 aaPredicted RBP16.92■□□□□ 0.3
SENP3-209ENST00000610454 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 LTBP1Q14766 1721 aa16.91■□□□□ 0.3
SENP3-209ENST00000610454 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
SENP3-209ENST00000610454 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
SENP3-209ENST00000610454 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
SENP3-209ENST00000610454 EAPPQ56P03 285 aaPredicted RBP16.91■□□□□ 0.3
SENP3-209ENST00000610454 TAF1DQ9H5J8 278 aaPredicted RBP16.91■□□□□ 0.3
SENP3-209ENST00000610454 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
SENP3-209ENST00000610454 CSF1RP07333 972 aa16.9■□□□□ 0.3
SENP3-209ENST00000610454 EPHX2P34913 555 aa16.9■□□□□ 0.3
SENP3-209ENST00000610454 APLP1P51693 650 aa16.9■□□□□ 0.3
SENP3-209ENST00000610454 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
SENP3-209ENST00000610454 CIAPIN1Q6FI81 312 aa16.9■□□□□ 0.3
SENP3-209ENST00000610454 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
SENP3-209ENST00000610454 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 RAD17O75943 681 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 ATP2B4P23634 1241 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 CXCL9Q07325 125 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 CCDC57Q2TAC2 916 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 LDHDQ86WU2 507 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 DBNDD1Q9H9R9 158 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
SENP3-209ENST00000610454 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
SENP3-209ENST00000610454 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
SENP3-209ENST00000610454 GPR101Q96P66 508 aaPredicted RBP16.88■□□□□ 0.29
SENP3-209ENST00000610454 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
SENP3-209ENST00000610454 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
SENP3-209ENST00000610454 ECE2O60344 883 aa16.87■□□□□ 0.29
SENP3-209ENST00000610454 KCNJ4P48050 445 aa16.87■□□□□ 0.29
SENP3-209ENST00000610454 FOXO4P98177 505 aa16.87■□□□□ 0.29
SENP3-209ENST00000610454 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
SENP3-209ENST00000610454 ANKRD2Q9GZV1 360 aa16.87■□□□□ 0.29
SENP3-209ENST00000610454 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
SENP3-209ENST00000610454 SCNN1DP51172 638 aa16.86■□□□□ 0.29
SENP3-209ENST00000610454 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
SENP3-209ENST00000610454 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
SENP3-209ENST00000610454 YDJCA8MPS7 323 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
SENP3-209ENST00000610454 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
SENP3-209ENST00000610454 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
SENP3-209ENST00000610454 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 GPRC5DQ9NZD1 345 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
SENP3-209ENST00000610454 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
SENP3-209ENST00000610454 EPS15P42566 896 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 LEMD3Q9Y2U8 911 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 UTYO14607 1347 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 MED23Q9ULK4 1368 aa16.84■□□□□ 0.29
SENP3-209ENST00000610454 PSMD14O00487 310 aa16.83■□□□□ 0.28
SENP3-209ENST00000610454 CHRNDQ07001 517 aa16.83■□□□□ 0.28
SENP3-209ENST00000610454 LDHAL6AQ6ZMR3 332 aa16.83■□□□□ 0.28
SENP3-209ENST00000610454 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
SENP3-209ENST00000610454 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
SENP3-209ENST00000610454 ZNF804BA4D1E1 1349 aa16.82■□□□□ 0.28
SENP3-209ENST00000610454 H7C1D1 291 aa16.82■□□□□ 0.28
SENP3-209ENST00000610454 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
SENP3-209ENST00000610454 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
SENP3-209ENST00000610454 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
SENP3-209ENST00000610454 ADAMTSL1Q8N6G6 1762 aa16.82■□□□□ 0.28
SENP3-209ENST00000610454 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
SENP3-209ENST00000610454 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
SENP3-209ENST00000610454 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
SENP3-209ENST00000610454 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
SENP3-209ENST00000610454 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
SENP3-209ENST00000610454 A0A1B0GUL6 1792 aa16.8■□□□□ 0.28
SENP3-209ENST00000610454 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
SENP3-209ENST00000610454 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
SENP3-209ENST00000610454 DPF2Q92785 391 aa16.8■□□□□ 0.28
SENP3-209ENST00000610454 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
SENP3-209ENST00000610454 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
SENP3-209ENST00000610454 SCN9AQ15858 1988 aa16.8■□□□□ 0.28
SENP3-209ENST00000610454 PSME4Q14997 1843 aa16.8■□□□□ 0.28
SENP3-209ENST00000610454 PLIN1O60240 522 aa16.79■□□□□ 0.28
SENP3-209ENST00000610454 RABL6Q3YEC7 729 aaPredicted RBP16.79■□□□□ 0.28
SENP3-209ENST00000610454 MAP1SQ66K74 1059 aaPredicted RBP16.79■□□□□ 0.28
SENP3-209ENST00000610454 CNTROBQ8N137 903 aa16.79■□□□□ 0.28
SENP3-209ENST00000610454 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SENP3-209ENST00000610454 FBXW7Q969H0 707 aa16.79■□□□□ 0.28
SENP3-209ENST00000610454 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
SENP3-209ENST00000610454 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
SENP3-209ENST00000610454 USP17L3A6NCW0 530 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 USP17L4A6NCW7 530 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 TAF5LO75529 589 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 BCAR3O75815 825 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 USP17L1Q7RTZ2 530 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
SENP3-209ENST00000610454 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
SENP3-209ENST00000610454 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
SENP3-209ENST00000610454 HTRA3P83110 453 aa16.77■□□□□ 0.28
SENP3-209ENST00000610454 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
SENP3-209ENST00000610454 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
SENP3-209ENST00000610454 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
SENP3-209ENST00000610454 MROH5Q6ZUA9 1318 aa16.76■□□□□ 0.27
SENP3-209ENST00000610454 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms