RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 RBM46Q8TBY0 533 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 API5Q9BZZ5 524 aaKnown RBP16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 GGA1Q9UJY5 639 aa16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 ANKRD18BA2A2Z9 1011 aa16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 CXCL9Q07325 125 aa16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 IFIT5Q13325 482 aaKnown RBP16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 C16orf71Q8IYS4 520 aaPredicted RBP16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 XDHP47989 1333 aa16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
SHROOM1-207ENST00000606676 UFL1O94874 794 aa16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 EYA3Q99504 573 aa16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 GJA3Q9Y6H8 435 aa16.14■□□□□ 0.17
SHROOM1-207ENST00000606676 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 ZC3H12CQ9C0D7 883 aaKnown RBP16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
SHROOM1-207ENST00000606676 IQCA1LA6NCM1 817 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 RAD17O75943 681 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 TRIM27P14373 513 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 SCNN1DP51172 638 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 CCDC57Q2TAC2 916 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 INTS3Q68E01 1043 aaKnown RBP16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 KCNQ5Q9NR82 932 aa16.12■□□□□ 0.17
SHROOM1-207ENST00000606676 ECE2O60344 883 aa16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 CHRNDQ07001 517 aa16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 FSTL1Q12841 308 aa16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
SHROOM1-207ENST00000606676 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SHROOM1-207ENST00000606676 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
SHROOM1-207ENST00000606676 HSPA6P17066 643 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 EPHX2P34913 555 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 EPS15P42566 896 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 TNIP1Q15025 636 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 SPEF2Q9C093 1822 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
SHROOM1-207ENST00000606676 SCN4AP35499 1836 aa16.08■□□□□ 0.17
SHROOM1-207ENST00000606676 SNAP23O00161 211 aa16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 PSMD14O00487 310 aa16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 TAF5LO75529 589 aa16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 HELBQ8NG08 1087 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 MEIS3Q99687 375 aa16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
SHROOM1-207ENST00000606676 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 KLRK1P26718 216 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 RIPOR2Q9Y4F9 1068 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 IRS2Q9Y4H2 1338 aa16.07■□□□□ 0.16
SHROOM1-207ENST00000606676 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 EAPPQ56P03 285 aaPredicted RBP16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 LDHDQ86WU2 507 aa16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
SHROOM1-207ENST00000606676 G3V3G9 751 aa16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 VIL1P09327 827 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 DCAF8Q5TAQ9 597 aa16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 PNMA8AQ86V59 439 aaPredicted RBP16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 TMEM57Q8N5G2 664 aa16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 KLHDC4Q8TBB5 520 aa16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 DPF2Q92785 391 aa16.05■□□□□ 0.16
SHROOM1-207ENST00000606676 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 PLIN1O60240 522 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 KCNJ4P48050 445 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 C15orf52Q6ZUT6 534 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 ADARB2Q9NS39 739 aaKnown RBP16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
SHROOM1-207ENST00000606676 GNAI3P08754 354 aa16.03■□□□□ 0.16
SHROOM1-207ENST00000606676 RLBP1P12271 317 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms