RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 GPSM2P81274 684 aa22.99■■□□□ 1.27
SHKBP1-227ENST00000602011 TBC1D16Q8TBP0 767 aa22.99■■□□□ 1.27
SHKBP1-227ENST00000602011 CASP8AP2Q9UKL3 1982 aa22.99■■□□□ 1.27
SHKBP1-227ENST00000602011 PSMD14O00487 310 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 RIMBP2O15034 1052 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 PDE8AO60658 829 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 EGFRP00533 1210 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 RTL5Q5HYW3 569 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 SAMD7Q7Z3H4 446 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 DBNDD1Q9H9R9 158 aa22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 CWC25Q9NXE8 425 aaPredicted RBP22.98■■□□□ 1.27
SHKBP1-227ENST00000602011 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
SHKBP1-227ENST00000602011 G3V3G9 751 aa22.97■■□□□ 1.27
SHKBP1-227ENST00000602011 DCAF8Q5TAQ9 597 aa22.97■■□□□ 1.27
SHKBP1-227ENST00000602011 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
SHKBP1-227ENST00000602011 KCNQ5Q9NR82 932 aa22.97■■□□□ 1.27
SHKBP1-227ENST00000602011 ECE2O60344 883 aa22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 TBC1D10BQ4KMP7 808 aaPredicted RBP22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 MYD88Q99836 296 aa22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 MCOLN1Q9GZU1 580 aa22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 LRRC37AA6NMS7 1700 aa22.96■■□□□ 1.27
SHKBP1-227ENST00000602011 ELL2O00472 640 aaPredicted RBP22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 VIL1P09327 827 aaKnown RBP22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 BRPF1P55201 1214 aaPredicted RBP22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 DCPSQ96C86 337 aaKnown RBP22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 ANKIB1Q9P2G1 1089 aa22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 GGA1Q9UJY5 639 aa22.95■■□□□ 1.26
SHKBP1-227ENST00000602011 HUNKP57058 714 aa22.94■■□□□ 1.26
SHKBP1-227ENST00000602011 NOGQ13253 232 aa22.94■■□□□ 1.26
SHKBP1-227ENST00000602011 DOK7Q18PE1 504 aa22.94■■□□□ 1.26
SHKBP1-227ENST00000602011 NCBP3Q53F19 620 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-227ENST00000602011 RBM26Q5T8P6 1007 aaKnown RBP22.94■■□□□ 1.26
SHKBP1-227ENST00000602011 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
SHKBP1-227ENST00000602011 C8orf58Q8NAV2 365 aa22.93■■□□□ 1.26
SHKBP1-227ENST00000602011 ADM5C9JUS6 153 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 MLLT1Q03111 559 aaPredicted RBP22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 NEXNQ0ZGT2 675 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 KSR2Q6VAB6 950 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 ANKRD18AQ8IVF6 992 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 AGBL3Q8NEM8 1001 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 CDC5LQ99459 802 aaKnown RBP22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 STK31Q9BXU1 1019 aa22.92■■□□□ 1.26
SHKBP1-227ENST00000602011 RTL9Q8NET4 1388 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 POLR2AP24928 1970 aaKnown RBP22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 UFL1O94874 794 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 ATP2B4P23634 1241 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 PODNQ7Z5L7 613 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 C2orf69Q8N8R5 385 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 CCDC102AQ96A19 550 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
SHKBP1-227ENST00000602011 XDHP47989 1333 aa22.9■■□□□ 1.26
SHKBP1-227ENST00000602011 DGKZQ13574 1117 aa22.9■■□□□ 1.26
SHKBP1-227ENST00000602011 ASTN2O75129 1339 aaPredicted RBP22.89■■□□□ 1.26
SHKBP1-227ENST00000602011 RGS19P49795 217 aa22.89■■□□□ 1.25
SHKBP1-227ENST00000602011 MMP14P50281 582 aa22.89■■□□□ 1.25
SHKBP1-227ENST00000602011 MAP3K2Q9Y2U5 619 aa22.89■■□□□ 1.25
SHKBP1-227ENST00000602011 SULF1Q8IWU6 871 aa22.88■■□□□ 1.25
SHKBP1-227ENST00000602011 GBA2Q9HCG7 927 aaPredicted RBP22.88■■□□□ 1.25
SHKBP1-227ENST00000602011 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 FAM155AB1AL88 458 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 SLC34A2O95436 690 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 ZNF280AP59817 542 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 KIF4BQ2VIQ3 1234 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 RGMBQ6NW40 437 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 RSBN1LQ6PCB5 846 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 BSDC1Q9NW68 430 aaPredicted RBP22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 ZNF609O15014 1411 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 SCN9AQ15858 1988 aa22.87■■□□□ 1.25
SHKBP1-227ENST00000602011 IL16Q14005 1332 aa22.86■■□□□ 1.25
SHKBP1-227ENST00000602011 REM2Q8IYK8 340 aaPredicted RBP22.86■■□□□ 1.25
SHKBP1-227ENST00000602011 CTSWP56202 376 aa22.85■■□□□ 1.25
SHKBP1-227ENST00000602011 JARID2Q92833 1246 aaPredicted RBP22.85■■□□□ 1.25
SHKBP1-227ENST00000602011 USP17L3A6NCW0 530 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 USP17L4A6NCW7 530 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 FKBP1BP68106 108 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 KIF23Q02241 960 aaPredicted RBP22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 USP17L1Q7RTZ2 530 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 TTLL11Q8NHH1 800 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 GGA3Q9NZ52 723 aa22.84■■□□□ 1.25
SHKBP1-227ENST00000602011 IGKV5-2P06315 115 aa22.83■■□□□ 1.25
SHKBP1-227ENST00000602011 USP17L8P0C7I0 530 aa22.83■■□□□ 1.25
SHKBP1-227ENST00000602011 WWC1Q8IX03 1113 aa22.83■■□□□ 1.25
SHKBP1-227ENST00000602011 TSPYL6Q8N831 410 aa22.83■■□□□ 1.25
SHKBP1-227ENST00000602011 CCDC85AQ96PX6 553 aaPredicted RBP22.83■■□□□ 1.25
SHKBP1-227ENST00000602011 PITPNM2Q9BZ72 1349 aa22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 ZNF157P51786 506 aaPredicted RBP22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 TWISTNBQ3B726 338 aaPredicted RBP22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 GMLQ99445 158 aa22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 SAGE1Q9NXZ1 904 aa22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 LEMD3Q9Y2U8 911 aa22.82■■□□□ 1.24
SHKBP1-227ENST00000602011 H7C1W4 665 aa22.81■■□□□ 1.24
SHKBP1-227ENST00000602011 SLC4A2P04920 1241 aa22.81■■□□□ 1.24
SHKBP1-227ENST00000602011 MINPP1Q9UNW1 487 aa22.81■■□□□ 1.24
SHKBP1-227ENST00000602011 SCAF8Q9UPN6 1271 aaKnown RBP22.81■■□□□ 1.24
SHKBP1-227ENST00000602011 MYO3BQ8WXR4 1341 aa22.81■■□□□ 1.24
SHKBP1-227ENST00000602011 NEURL1BA8MQ27 555 aa22.8■■□□□ 1.24
SHKBP1-227ENST00000602011 TRPA1O75762 1119 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms