RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SAMD7Q7Z3H4 446 aa23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 EYA3Q99504 573 aa23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 CWC25Q9NXE8 425 aaPredicted RBP23.24■■□□□ 1.31
CHMP2A-208ENST00000601220 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
CHMP2A-208ENST00000601220 HHIPL1Q96JK4 782 aa23.23■■□□□ 1.31
CHMP2A-208ENST00000601220 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 IGKV5-2P06315 115 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 CCDC152Q4G0S7 254 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 DLK2Q6UY11 383 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 TSR2Q969E8 191 aaKnown RBP23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 MAP3K2Q9Y2U5 619 aa23.22■■□□□ 1.31
CHMP2A-208ENST00000601220 AOC2O75106 756 aa23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 RPS12P25398 132 aaKnown RBP23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 MAP2K2P36507 400 aa23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 PAXIP1Q6ZW49 1069 aaPredicted RBP23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 USP48Q86UV5 1035 aa23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
CHMP2A-208ENST00000601220 GRM1Q13255 1194 aa23.2■■□□□ 1.3
CHMP2A-208ENST00000601220 TBC1D10BQ4KMP7 808 aaPredicted RBP23.2■■□□□ 1.3
CHMP2A-208ENST00000601220 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
CHMP2A-208ENST00000601220 ZC3H12CQ9C0D7 883 aaKnown RBP23.2■■□□□ 1.3
CHMP2A-208ENST00000601220 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
CHMP2A-208ENST00000601220 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
CHMP2A-208ENST00000601220 CCDC85AQ96PX6 553 aaPredicted RBP23.19■■□□□ 1.3
CHMP2A-208ENST00000601220 ANKIB1Q9P2G1 1089 aa23.19■■□□□ 1.3
CHMP2A-208ENST00000601220 GGA1Q9UJY5 639 aa23.19■■□□□ 1.3
CHMP2A-208ENST00000601220 UFL1O94874 794 aa23.18■■□□□ 1.3
CHMP2A-208ENST00000601220 G2E3Q7L622 706 aa23.17■■□□□ 1.3
CHMP2A-208ENST00000601220 ZNF408Q9H9D4 720 aa23.17■■□□□ 1.3
CHMP2A-208ENST00000601220 WTIPA6NIX2 430 aaPredicted RBP23.16■■□□□ 1.3
CHMP2A-208ENST00000601220 CTSWP56202 376 aa23.16■■□□□ 1.3
CHMP2A-208ENST00000601220 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
CHMP2A-208ENST00000601220 TTLL11Q8NHH1 800 aa23.16■■□□□ 1.3
CHMP2A-208ENST00000601220 RBM26Q5T8P6 1007 aaKnown RBP23.15■■□□□ 1.3
CHMP2A-208ENST00000601220 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
CHMP2A-208ENST00000601220 ANKRD18AQ8IVF6 992 aa23.15■■□□□ 1.3
CHMP2A-208ENST00000601220 XDHP47989 1333 aa23.14■■□□□ 1.3
CHMP2A-208ENST00000601220 NEURL1BA8MQ27 555 aa23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 ZNF280AP59817 542 aaPredicted RBP23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 GMLQ99445 158 aa23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 ZNF609O15014 1411 aa23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 SCN9AQ15858 1988 aa23.14■■□□□ 1.29
CHMP2A-208ENST00000601220 IL16Q14005 1332 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 ADM5C9JUS6 153 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 H7C1W4 665 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 KIF4BQ2VIQ3 1234 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 ZIC5Q96T25 663 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 BEGAINQ9BUH8 593 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 GREM2Q9H772 168 aa23.13■■□□□ 1.29
CHMP2A-208ENST00000601220 ASTN2O75129 1339 aaPredicted RBP23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 ATP2B4P23634 1241 aa23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 BRPF1P55201 1214 aaPredicted RBP23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 AGBL3Q8NEM8 1001 aa23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 BSDC1Q9NW68 430 aaPredicted RBP23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 MINPP1Q9UNW1 487 aa23.12■■□□□ 1.29
CHMP2A-208ENST00000601220 HUNKP57058 714 aa23.11■■□□□ 1.29
CHMP2A-208ENST00000601220 DCPSQ96C86 337 aaKnown RBP23.11■■□□□ 1.29
CHMP2A-208ENST00000601220 CDC5LQ99459 802 aaKnown RBP23.11■■□□□ 1.29
CHMP2A-208ENST00000601220 FAM155AB1AL88 458 aaPredicted RBP23.1■■□□□ 1.29
CHMP2A-208ENST00000601220 NEXNQ0ZGT2 675 aa23.1■■□□□ 1.29
CHMP2A-208ENST00000601220 ABHD8Q96I13 439 aa23.1■■□□□ 1.29
CHMP2A-208ENST00000601220 G3V3G9 751 aa23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 CASP7P55210 303 aa23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 DCAF8Q5TAQ9 597 aa23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 PODNQ7Z5L7 613 aa23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 GBA2Q9HCG7 927 aaPredicted RBP23.09■■□□□ 1.29
CHMP2A-208ENST00000601220 CA12O43570 354 aa23.08■■□□□ 1.29
CHMP2A-208ENST00000601220 NOGQ13253 232 aa23.08■■□□□ 1.29
CHMP2A-208ENST00000601220 GCKRQ14397 625 aa23.08■■□□□ 1.29
CHMP2A-208ENST00000601220 GGA3Q9NZ52 723 aa23.08■■□□□ 1.29
CHMP2A-208ENST00000601220 MED23Q9ULK4 1368 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 USP17L3A6NCW0 530 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 USP17L4A6NCW7 530 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 VAMP4O75379 141 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 FLIIQ13045 1269 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 SCARF1Q14162 830 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 RGMBQ6NW40 437 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 USP17L1Q7RTZ2 530 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 UBE3BQ7Z3V4 1068 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
CHMP2A-208ENST00000601220 CSF1RP07333 972 aa23.06■■□□□ 1.28
CHMP2A-208ENST00000601220 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-208ENST00000601220 C2orf69Q8N8R5 385 aa23.06■■□□□ 1.28
CHMP2A-208ENST00000601220 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
CHMP2A-208ENST00000601220 ANGEL2Q5VTE6 544 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-208ENST00000601220 TXNRD3Q86VQ6 643 aa23.05■■□□□ 1.28
CHMP2A-208ENST00000601220 SULF1Q8IWU6 871 aa23.05■■□□□ 1.28
CHMP2A-208ENST00000601220 MYOZ2Q9NPC6 264 aa23.05■■□□□ 1.28
CHMP2A-208ENST00000601220 DACT2Q5SW24 774 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms