RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NLGN2Q8NFZ4 835 aa25.33■■□□□ 1.65
PNKP-215ENST00000600910 PPEF1O14829 653 aaPredicted RBP25.32■■□□□ 1.64
PNKP-215ENST00000600910 IL15P40933 162 aaPredicted RBP25.32■■□□□ 1.64
PNKP-215ENST00000600910 PRPF40BQ6NWY9 871 aaKnown RBP25.32■■□□□ 1.64
PNKP-215ENST00000600910 CENPQQ7L2Z9 268 aaPredicted RBP25.32■■□□□ 1.64
PNKP-215ENST00000600910 RAB11FIP3O75154 756 aa25.31■■□□□ 1.64
PNKP-215ENST00000600910 SASH1O94885 1247 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 SLC51AQ86UW1 340 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 TTLL6Q8N841 843 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 GOLGB1Q14789 3259 aaKnown RBP25.3■■□□□ 1.64
PNKP-215ENST00000600910 ERC1Q8IUD2 1116 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 PIM2Q9P1W9 311 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 MINPP1Q9UNW1 487 aa25.3■■□□□ 1.64
PNKP-215ENST00000600910 SLX4Q8IY92 1834 aa25.29■■□□□ 1.64
PNKP-215ENST00000600910 METTL24Q5JXM2 366 aa25.29■■□□□ 1.64
PNKP-215ENST00000600910 TMC4Q7Z404 712 aa25.29■■□□□ 1.64
PNKP-215ENST00000600910 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
PNKP-215ENST00000600910 MROH5Q6ZUA9 1318 aa25.29■■□□□ 1.64
PNKP-215ENST00000600910 CHRNDQ07001 517 aa25.28■■□□□ 1.64
PNKP-215ENST00000600910 KIF1BPQ96EK5 621 aa25.28■■□□□ 1.64
PNKP-215ENST00000600910 SYT17Q9BSW7 474 aa25.28■■□□□ 1.64
PNKP-215ENST00000600910 LRRCC1Q9C099 1032 aa25.28■■□□□ 1.64
PNKP-215ENST00000600910 WWC3Q9ULE0 1092 aa25.28■■□□□ 1.64
PNKP-215ENST00000600910 BRCA1P38398 1863 aaKnown RBP25.28■■□□□ 1.64
PNKP-215ENST00000600910 TFCP2Q12800 502 aa25.27■■□□□ 1.64
PNKP-215ENST00000600910 ATP6V0A2Q9Y487 856 aa25.27■■□□□ 1.64
PNKP-215ENST00000600910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.27■■□□□ 1.64
PNKP-215ENST00000600910 ANKRD45Q5TZF3 282 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 SP8Q8IXZ3 490 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 HELBQ8NG08 1087 aaPredicted RBP25.26■■□□□ 1.63
PNKP-215ENST00000600910 CEP126Q9P2H0 1117 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 VGLL2Q8N8G2 317 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 IL1RAPL2Q9NP60 686 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
PNKP-215ENST00000600910 SMARCA5O60264 1052 aaPredicted RBP25.25■■□□□ 1.63
PNKP-215ENST00000600910 BCL11AQ9H165 835 aa25.25■■□□□ 1.63
PNKP-215ENST00000600910 ZNF219Q9P2Y4 722 aaPredicted RBP25.25■■□□□ 1.63
PNKP-215ENST00000600910 A0A1B0GUL6 1792 aa25.24■■□□□ 1.63
PNKP-215ENST00000600910 TAF5LO75529 589 aa25.24■■□□□ 1.63
PNKP-215ENST00000600910 PDE8BO95263 885 aa25.24■■□□□ 1.63
PNKP-215ENST00000600910 DALRD3Q5D0E6 543 aaKnown RBP25.24■■□□□ 1.63
PNKP-215ENST00000600910 OLFM4Q6UX06 510 aa25.24■■□□□ 1.63
PNKP-215ENST00000600910 NUCB1Q02818 461 aa25.23■■□□□ 1.63
PNKP-215ENST00000600910 C7orf43Q8WVR3 580 aa25.23■■□□□ 1.63
PNKP-215ENST00000600910 ANKRD2Q9GZV1 360 aa25.23■■□□□ 1.63
PNKP-215ENST00000600910 TMX4Q9H1E5 349 aaPredicted RBP25.23■■□□□ 1.63
PNKP-215ENST00000600910 ANKIB1Q9P2G1 1089 aa25.23■■□□□ 1.63
PNKP-215ENST00000600910 ZBTB47Q9UFB7 747 aaPredicted RBP25.23■■□□□ 1.63
PNKP-215ENST00000600910 C21orf2O43822 256 aa25.22■■□□□ 1.63
PNKP-215ENST00000600910 GPSM2P81274 684 aa25.22■■□□□ 1.63
PNKP-215ENST00000600910 CHD1LQ86WJ1 897 aa25.22■■□□□ 1.63
PNKP-215ENST00000600910 XDHP47989 1333 aa25.21■■□□□ 1.63
PNKP-215ENST00000600910 CLASRPQ8N2M8 674 aaKnown RBP25.21■■□□□ 1.63
PNKP-215ENST00000600910 LNPKQ9C0E8 428 aa25.21■■□□□ 1.63
PNKP-215ENST00000600910 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
PNKP-215ENST00000600910 BCS1LQ9Y276 419 aa25.21■■□□□ 1.63
PNKP-215ENST00000600910 TNNI3KQ59H18 835 aa25.2■■□□□ 1.62
PNKP-215ENST00000600910 FPGT-TNNI3KV9GXZ4 949 aa25.2■■□□□ 1.62
PNKP-215ENST00000600910 SNAP23O00161 211 aa25.19■■□□□ 1.62
PNKP-215ENST00000600910 PUM3Q15397 648 aaKnown RBP25.19■■□□□ 1.62
PNKP-215ENST00000600910 GPR108Q9NPR9 543 aa25.19■■□□□ 1.62
PNKP-215ENST00000600910 AKAP2Q9Y2D5 859 aa25.19■■□□□ 1.62
PNKP-215ENST00000600910 WTIPA6NIX2 430 aaPredicted RBP25.19■■□□□ 1.62
PNKP-215ENST00000600910 EAF2Q96CJ1 260 aaPredicted RBP25.19■■□□□ 1.62
PNKP-215ENST00000600910 PODXL2Q9NZ53 605 aa25.19■■□□□ 1.62
PNKP-215ENST00000600910 ZNF609O15014 1411 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 LTBP1Q14766 1721 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 A0A1B0GUL7 405 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 ATP2B3Q16720 1220 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 CC2D2BQ6DHV5 1058 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 MPNDQ8N594 471 aa25.18■■□□□ 1.62
PNKP-215ENST00000600910 FGFR2P21802 821 aa25.17■■□□□ 1.62
PNKP-215ENST00000600910 KCNJ4P48050 445 aa25.17■■□□□ 1.62
PNKP-215ENST00000600910 TIMM10P62072 90 aa25.17■■□□□ 1.62
PNKP-215ENST00000600910 DPP8Q6V1X1 898 aaPredicted RBP25.17■■□□□ 1.62
PNKP-215ENST00000600910 AACSQ86V21 672 aa25.17■■□□□ 1.62
PNKP-215ENST00000600910 ZNF804BA4D1E1 1349 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 UBE4AQ14139 1066 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 CCDC93Q567U6 631 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 C16orf71Q8IYS4 520 aaPredicted RBP25.16■■□□□ 1.62
PNKP-215ENST00000600910 LPIN2Q92539 896 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 GGA1Q9UJY5 639 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 LEMD3Q9Y2U8 911 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 SNED1Q8TER0 1413 aa25.16■■□□□ 1.62
PNKP-215ENST00000600910 UFL1O94874 794 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 SOGA3Q5TF21 947 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 NEUROD6Q96NK8 337 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 CCDC8Q9H0W5 538 aaPredicted RBP25.15■■□□□ 1.62
PNKP-215ENST00000600910 ATP2B4P23634 1241 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 TBC1D16Q8TBP0 767 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 POLLQ9UGP5 575 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 DUOX1Q9NRD9 1551 aa25.15■■□□□ 1.62
PNKP-215ENST00000600910 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.61
PNKP-215ENST00000600910 SLC5A1P13866 664 aa25.14■■□□□ 1.61
PNKP-215ENST00000600910 TLR7Q9NYK1 1049 aaKnown RBP25.14■■□□□ 1.61
PNKP-215ENST00000600910 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.61
PNKP-215ENST00000600910 C6orf229H3BNL8 230 aa25.13■■□□□ 1.61
PNKP-215ENST00000600910 IFIT1P09914 478 aaKnown RBP25.13■■□□□ 1.61
PNKP-215ENST00000600910 GRIPAP1Q4V328 841 aa25.13■■□□□ 1.61
PNKP-215ENST00000600910 RTKN2Q8IZC4 609 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms