RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 DGKZQ13574 1117 aa8□□□□□ -1.13
VRK3-220ENST00000600259 CSRNP1Q96S65 589 aa8□□□□□ -1.13
VRK3-220ENST00000600259 GMLQ99445 158 aa8□□□□□ -1.13
VRK3-220ENST00000600259 GBA2Q9HCG7 927 aaPredicted RBP8□□□□□ -1.13
VRK3-220ENST00000600259 SEC31BQ9NQW1 1179 aa8□□□□□ -1.13
VRK3-220ENST00000600259 RNF186Q9NXI6 227 aa8□□□□□ -1.13
VRK3-220ENST00000600259 CASP8AP2Q9UKL3 1982 aa8□□□□□ -1.13
VRK3-220ENST00000600259 TAF1P21675 1872 aa8□□□□□ -1.13
VRK3-220ENST00000600259 LAMB2P55268 1798 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 ANKRD36CQ5JPF3 1778 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
VRK3-220ENST00000600259 IRS4O14654 1257 aaPredicted RBP7.99□□□□□ -1.13
VRK3-220ENST00000600259 ZNF853P0CG23 659 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 ZNF280AP59817 542 aaPredicted RBP7.99□□□□□ -1.13
VRK3-220ENST00000600259 RALBP1Q15311 655 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 NEUROD2Q15784 382 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 RBM26Q5T8P6 1007 aaKnown RBP7.99□□□□□ -1.13
VRK3-220ENST00000600259 HDGFL1Q5TGJ6 251 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 CCDC146Q8IYE0 955 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 C2orf69Q8N8R5 385 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 CCDC102AQ96A19 550 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 SAGE1Q9NXZ1 904 aa7.99□□□□□ -1.13
VRK3-220ENST00000600259 DBF4Q9UBU7 674 aaPredicted RBP7.99□□□□□ -1.13
VRK3-220ENST00000600259 LRRC37AA6NMS7 1700 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 TRPA1O75762 1119 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 SLC10A3P09131 477 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 ZBTB38Q8NAP3 1195 aaPredicted RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 DCPSQ96C86 337 aaKnown RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 EYA3Q99504 573 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
VRK3-220ENST00000600259 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 ADAMTS8Q9UP79 889 aa7.98□□□□□ -1.13
VRK3-220ENST00000600259 ZNF609O15014 1411 aa7.97□□□□□ -1.13
VRK3-220ENST00000600259 SCARF1Q14162 830 aa7.97□□□□□ -1.13
VRK3-220ENST00000600259 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
VRK3-220ENST00000600259 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
VRK3-220ENST00000600259 CDCA5Q96FF9 252 aa7.97□□□□□ -1.13
VRK3-220ENST00000600259 GGA3Q9NZ52 723 aa7.97□□□□□ -1.13
VRK3-220ENST00000600259 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
VRK3-220ENST00000600259 POLR2AP24928 1970 aaKnown RBP7.97□□□□□ -1.13
VRK3-220ENST00000600259 PDE4DIPQ5VU43 2346 aa7.96□□□□□ -1.13
VRK3-220ENST00000600259 DDX60Q8IY21 1712 aaKnown RBP7.96□□□□□ -1.14
VRK3-220ENST00000600259 PCCAP05165 728 aaPredicted RBP7.96□□□□□ -1.14
VRK3-220ENST00000600259 RASAL3Q86YV0 1011 aa7.96□□□□□ -1.14
VRK3-220ENST00000600259 CCDC191Q8NCU4 936 aa7.96□□□□□ -1.14
VRK3-220ENST00000600259 AGBL3Q8NEM8 1001 aa7.96□□□□□ -1.14
VRK3-220ENST00000600259 JARID2Q92833 1246 aaPredicted RBP7.96□□□□□ -1.14
VRK3-220ENST00000600259 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
VRK3-220ENST00000600259 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
VRK3-220ENST00000600259 SCN9AQ15858 1988 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 PDE8AO60658 829 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 UFL1O94874 794 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
VRK3-220ENST00000600259 MOB2Q70IA6 237 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 RIC3Q7Z5B4 369 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 SULF1Q8IWU6 871 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 C8orf58Q8NAV2 365 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 PCDH10Q9P2E7 1040 aa7.95□□□□□ -1.14
VRK3-220ENST00000600259 UBE2Q2LH0YL09 131 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 IGKV5-2P06315 115 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 USP17L8P0C7I0 530 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 TM4SF4P48230 202 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 SOX10P56693 466 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 FKBP1BP68106 108 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 CCDC152Q4G0S7 254 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 PRAMEF18Q5VWM3 479 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 PODNQ7Z5L7 613 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 CTU1Q7Z7A3 348 aaKnown RBP7.94□□□□□ -1.14
VRK3-220ENST00000600259 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
VRK3-220ENST00000600259 TTLL11Q8NHH1 800 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 MYD88Q99836 296 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
VRK3-220ENST00000600259 MYOZ2Q9NPC6 264 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 SCAF8Q9UPN6 1271 aaKnown RBP7.94□□□□□ -1.14
VRK3-220ENST00000600259 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
VRK3-220ENST00000600259 PITPNM2Q9BZ72 1349 aa7.94□□□□□ -1.14
VRK3-220ENST00000600259 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 ATP2B4P23634 1241 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 DDX10Q13206 875 aaKnown RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 DACT2Q5SW24 774 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 TXNRD3Q86VQ6 643 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 ZBED3Q96IU2 234 aaPredicted RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 CCDC85AQ96PX6 553 aaPredicted RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 MXD3Q9BW11 206 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 R3HDMLQ9H3Y0 253 aa7.93□□□□□ -1.14
VRK3-220ENST00000600259 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 CWC25Q9NXE8 425 aaPredicted RBP7.93□□□□□ -1.14
VRK3-220ENST00000600259 MINPP1Q9UNW1 487 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms