RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 GNAI3P08754 354 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 MPHOSPH8Q99549 860 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 SBF1O95248 1867 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 LRRC37AA6NMS7 1700 aa17.83■□□□□ 0.44
SHKBP1-217ENST00000598558 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 TAF5LO75529 589 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 CHRNDQ07001 517 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 KIAA2012Q0VF49 1180 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 LDHAL6AQ6ZMR3 332 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 RIPOR2Q9Y4F9 1068 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 CHD4Q14839 1912 aa17.82■□□□□ 0.44
SHKBP1-217ENST00000598558 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 FZD9O00144 591 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 UFL1O94874 794 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 TXNRD3Q86VQ6 643 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 C1orf115Q9H7X2 142 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 GGA1Q9UJY5 639 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
SHKBP1-217ENST00000598558 XDHP47989 1333 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 GNAI2P04899 355 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 KLRK1P26718 216 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 DOK7Q18PE1 504 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 WASHC4Q2M389 1173 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 MYH3P11055 1940 aa17.8■□□□□ 0.44
SHKBP1-217ENST00000598558 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 GLTPD2A6NH11 291 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 YDJCA8MPS7 323 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 POTECB2RU33 542 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 DDNO94850 711 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 MVPQ14764 893 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 VPS33BQ9H267 617 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
SHKBP1-217ENST00000598558 IRS2Q9Y4H2 1338 aa17.78■□□□□ 0.44
SHKBP1-217ENST00000598558 MTX1Q13505 466 aa17.78■□□□□ 0.44
SHKBP1-217ENST00000598558 ATG9AQ7Z3C6 839 aa17.78■□□□□ 0.44
SHKBP1-217ENST00000598558 DBNDD1Q9H9R9 158 aa17.78■□□□□ 0.44
SHKBP1-217ENST00000598558 CNNM1Q9NRU3 951 aa17.78■□□□□ 0.44
SHKBP1-217ENST00000598558 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 NIM1KQ8IY84 436 aa17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 ANKRD2Q9GZV1 360 aa17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
SHKBP1-217ENST00000598558 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 MS4A1P11836 297 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 CXCL9Q07325 125 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 ZC3H12CQ9C0D7 883 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 RRAGCQ9HB90 399 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 ZNRF3Q9ULT6 936 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
SHKBP1-217ENST00000598558 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 EYA2O00167 538 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 EYA3Q99504 573 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 SIL1Q9H173 461 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
SHKBP1-217ENST00000598558 KIF3CO14782 793 aa17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 ECE2O60344 883 aa17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 RAD17O75943 681 aa17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 COPRSQ9NQ92 184 aa17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 SPEF2Q9C093 1822 aa17.74■□□□□ 0.43
SHKBP1-217ENST00000598558 TIAM2Q8IVF5 1701 aa17.73■□□□□ 0.43
SHKBP1-217ENST00000598558 POLA2Q14181 598 aa17.73■□□□□ 0.43
SHKBP1-217ENST00000598558 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
SHKBP1-217ENST00000598558 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 METTL24Q5JXM2 366 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 CEP85Q6P2H3 762 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 SIRT2Q8IXJ6 389 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 DDX19BQ9UMR2 479 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
SHKBP1-217ENST00000598558 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-217ENST00000598558 PDE8BO95263 885 aa17.71■□□□□ 0.43
SHKBP1-217ENST00000598558 FGFR2P21802 821 aa17.71■□□□□ 0.43
SHKBP1-217ENST00000598558 C15orf52Q6ZUT6 534 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-217ENST00000598558 PSMD14O00487 310 aa17.7■□□□□ 0.42
SHKBP1-217ENST00000598558 CIAO1O76071 339 aa17.7■□□□□ 0.42
SHKBP1-217ENST00000598558 KCNJ4P48050 445 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms