RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 ITGA6P23229 1130 aa21.1■□□□□ 0.97
USHBP1-208ENST00000598309 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
USHBP1-208ENST00000598309 TNIP1Q15025 636 aa21.1■□□□□ 0.97
USHBP1-208ENST00000598309 CIAPIN1Q6FI81 312 aa21.1■□□□□ 0.97
USHBP1-208ENST00000598309 SMC4Q9NTJ3 1288 aa21.1■□□□□ 0.97
USHBP1-208ENST00000598309 C9orf78Q9NZ63 289 aaPredicted RBP21.1■□□□□ 0.97
USHBP1-208ENST00000598309 YDJCA8MPS7 323 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 POTEIP0CG38 1075 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 POTEJP0CG39 1038 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 FOXO4P98177 505 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 BCL2L13Q9BXK5 485 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 ZC3H12CQ9C0D7 883 aaKnown RBP21.09■□□□□ 0.97
USHBP1-208ENST00000598309 ADAMTSL1Q8N6G6 1762 aa21.09■□□□□ 0.97
USHBP1-208ENST00000598309 ATP2B4P23634 1241 aa21.08■□□□□ 0.97
USHBP1-208ENST00000598309 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.97
USHBP1-208ENST00000598309 MINPP1Q9UNW1 487 aa21.08■□□□□ 0.97
USHBP1-208ENST00000598309 UTYO14607 1347 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 ANKRD18BA2A2Z9 1011 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 RIMBP2O15034 1052 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 RAD17O75943 681 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 EAPPQ56P03 285 aaPredicted RBP21.07■□□□□ 0.96
USHBP1-208ENST00000598309 DBNDD1Q9H9R9 158 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 GPRC5DQ9NZD1 345 aa21.07■□□□□ 0.96
USHBP1-208ENST00000598309 ECE2O60344 883 aa21.06■□□□□ 0.96
USHBP1-208ENST00000598309 GMPSP49915 693 aaPredicted RBP21.06■□□□□ 0.96
USHBP1-208ENST00000598309 GPR101Q96P66 508 aaPredicted RBP21.06■□□□□ 0.96
USHBP1-208ENST00000598309 MPHOSPH8Q99549 860 aa21.06■□□□□ 0.96
USHBP1-208ENST00000598309 EPS15P42566 896 aa21.05■□□□□ 0.96
USHBP1-208ENST00000598309 IFIT5Q13325 482 aaKnown RBP21.05■□□□□ 0.96
USHBP1-208ENST00000598309 USP50Q70EL3 339 aaPredicted RBP21.05■□□□□ 0.96
USHBP1-208ENST00000598309 MED23Q9ULK4 1368 aa21.05■□□□□ 0.96
USHBP1-208ENST00000598309 SPEF2Q9C093 1822 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 DOK7Q18PE1 504 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 EPHA10Q5JZY3 1008 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 ANKRD2Q9GZV1 360 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 ADARB2Q9NS39 739 aaKnown RBP21.04■□□□□ 0.96
USHBP1-208ENST00000598309 CHMP3Q9Y3E7 222 aa21.04■□□□□ 0.96
USHBP1-208ENST00000598309 NBPF7P0C2Y1 421 aaPredicted RBP21.03■□□□□ 0.96
USHBP1-208ENST00000598309 CCT4P50991 539 aaKnown RBP21.03■□□□□ 0.96
USHBP1-208ENST00000598309 HNRNPUQ00839 825 aaKnown RBP eCLIP21.03■□□□□ 0.96
USHBP1-208ENST00000598309 CLEC11AQ9Y240 323 aa21.03■□□□□ 0.96
USHBP1-208ENST00000598309 LEMD3Q9Y2U8 911 aa21.03■□□□□ 0.96
USHBP1-208ENST00000598309 PASKQ96RG2 1323 aa21.03■□□□□ 0.96
USHBP1-208ENST00000598309 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 G3V3G9 751 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 PSMD14O00487 310 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 RPS12P25398 132 aaKnown RBP21.02■□□□□ 0.96
USHBP1-208ENST00000598309 RARSP54136 660 aaKnown RBP21.02■□□□□ 0.96
USHBP1-208ENST00000598309 DCAF8Q5TAQ9 597 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 DPF2Q92785 391 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 SUCLG2Q96I99 432 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 ZNF609O15014 1411 aa21.02■□□□□ 0.96
USHBP1-208ENST00000598309 CCDC57Q2TAC2 916 aa21.01■□□□□ 0.95
USHBP1-208ENST00000598309 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
USHBP1-208ENST00000598309 KAZALD1Q96I82 304 aa21.01■□□□□ 0.95
USHBP1-208ENST00000598309 API5Q9BZZ5 524 aaKnown RBP21.01■□□□□ 0.95
USHBP1-208ENST00000598309 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
USHBP1-208ENST00000598309 ITGBL1O95965 494 aaPredicted RBP21■□□□□ 0.95
USHBP1-208ENST00000598309 CHRNDQ07001 517 aa21■□□□□ 0.95
USHBP1-208ENST00000598309 RABL6Q3YEC7 729 aaPredicted RBP21■□□□□ 0.95
USHBP1-208ENST00000598309 PODNQ7Z5L7 613 aa21■□□□□ 0.95
USHBP1-208ENST00000598309 ZNF804BA4D1E1 1349 aa21■□□□□ 0.95
USHBP1-208ENST00000598309 VIL1P09327 827 aaKnown RBP20.99■□□□□ 0.95
USHBP1-208ENST00000598309 TAF7LQ5H9L4 462 aa20.99■□□□□ 0.95
USHBP1-208ENST00000598309 CNTROBQ8N137 903 aa20.99■□□□□ 0.95
USHBP1-208ENST00000598309 USP44Q9H0E7 712 aa20.99■□□□□ 0.95
USHBP1-208ENST00000598309 CNOT7Q9UIV1 285 aaKnown RBP20.99■□□□□ 0.95
USHBP1-208ENST00000598309 NOB1Q9ULX3 412 aaKnown RBP20.99■□□□□ 0.95
USHBP1-208ENST00000598309 SCN9AQ15858 1988 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 H7C1D1 291 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 HTRA3P83110 453 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 MAP1SQ66K74 1059 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-208ENST00000598309 MICALL2Q8IY33 904 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 KCNQ5Q9NR82 932 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
USHBP1-208ENST00000598309 ZBTB12Q9Y330 459 aaPredicted RBP20.98■□□□□ 0.95
USHBP1-208ENST00000598309 WTIPA6NIX2 430 aaPredicted RBP20.97■□□□□ 0.95
USHBP1-208ENST00000598309 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
USHBP1-208ENST00000598309 COA1Q9GZY4 146 aa20.97■□□□□ 0.95
USHBP1-208ENST00000598309 BICC1Q9H694 974 aaKnown RBP20.97■□□□□ 0.95
USHBP1-208ENST00000598309 ZBED9Q6R2W3 1325 aa20.97■□□□□ 0.95
USHBP1-208ENST00000598309 KCNJ4P48050 445 aa20.96■□□□□ 0.95
USHBP1-208ENST00000598309 LDHAL6AQ6ZMR3 332 aa20.96■□□□□ 0.95
USHBP1-208ENST00000598309 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
USHBP1-208ENST00000598309 ZC3H15Q8WU90 426 aaKnown RBP20.96■□□□□ 0.95
USHBP1-208ENST00000598309 PSME4Q14997 1843 aa20.96■□□□□ 0.95
USHBP1-208ENST00000598309 RSBN1LQ6PCB5 846 aaPredicted RBP20.95■□□□□ 0.94
USHBP1-208ENST00000598309 C15orf52Q6ZUT6 534 aaKnown RBP20.95■□□□□ 0.94
USHBP1-208ENST00000598309 AGBL3Q8NEM8 1001 aa20.95■□□□□ 0.94
USHBP1-208ENST00000598309 ZNF594Q96JF6 807 aaPredicted RBP20.95■□□□□ 0.94
USHBP1-208ENST00000598309 CNNM1Q9NRU3 951 aa20.95■□□□□ 0.94
USHBP1-208ENST00000598309 PGAP2Q9UHJ9 254 aa20.95■□□□□ 0.94
USHBP1-208ENST00000598309 SHTN1A0MZ66 631 aa20.94■□□□□ 0.94
USHBP1-208ENST00000598309 USP17L3A6NCW0 530 aa20.94■□□□□ 0.94
USHBP1-208ENST00000598309 USP17L4A6NCW7 530 aa20.94■□□□□ 0.94
USHBP1-208ENST00000598309 USP17L1Q7RTZ2 530 aa20.94■□□□□ 0.94
USHBP1-208ENST00000598309 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
USHBP1-208ENST00000598309 A0A1B0GUL6 1792 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms