RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RFX5P48382 616 aaPredicted RBP25.42■■□□□ 1.66
PNKP-211ENST00000598020 GPSM2P81274 684 aa25.42■■□□□ 1.66
PNKP-211ENST00000598020 SUPT20HQ8NEM7 779 aa25.42■■□□□ 1.66
PNKP-211ENST00000598020 CHMP4BQ9H444 224 aaKnown RBP25.42■■□□□ 1.66
PNKP-211ENST00000598020 NSFL1CQ9UNZ2 370 aaKnown RBP25.42■■□□□ 1.66
PNKP-211ENST00000598020 TAF7LQ5H9L4 462 aa25.41■■□□□ 1.66
PNKP-211ENST00000598020 C9orf131Q5VYM1 1079 aa25.41■■□□□ 1.66
PNKP-211ENST00000598020 ZNF594Q96JF6 807 aaPredicted RBP25.41■■□□□ 1.66
PNKP-211ENST00000598020 DUOX1Q9NRD9 1551 aa25.4■■□□□ 1.66
PNKP-211ENST00000598020 LDHAL6AQ6ZMR3 332 aa25.4■■□□□ 1.66
PNKP-211ENST00000598020 XDHP47989 1333 aa25.39■■□□□ 1.66
PNKP-211ENST00000598020 ANKRD2Q9GZV1 360 aa25.39■■□□□ 1.66
PNKP-211ENST00000598020 ZNF277Q9NRM2 450 aaPredicted RBP25.39■■□□□ 1.66
PNKP-211ENST00000598020 RNF181Q9P0P0 153 aa25.39■■□□□ 1.66
PNKP-211ENST00000598020 ZC3H4Q9UPT8 1303 aaKnown RBP25.38■■□□□ 1.65
PNKP-211ENST00000598020 IARSP41252 1262 aaKnown RBP25.38■■□□□ 1.65
PNKP-211ENST00000598020 ZBTB40Q9NUA8 1239 aa25.38■■□□□ 1.65
PNKP-211ENST00000598020 ANKIB1Q9P2G1 1089 aa25.38■■□□□ 1.65
PNKP-211ENST00000598020 POLLQ9UGP5 575 aa25.38■■□□□ 1.65
PNKP-211ENST00000598020 PTPN12Q05209 780 aaKnown RBP25.37■■□□□ 1.65
PNKP-211ENST00000598020 TBC1D16Q8TBP0 767 aa25.37■■□□□ 1.65
PNKP-211ENST00000598020 FBXO3Q9UK99 471 aa25.37■■□□□ 1.65
PNKP-211ENST00000598020 RIPOR2Q9Y4F9 1068 aa25.37■■□□□ 1.65
PNKP-211ENST00000598020 ATP2B4P23634 1241 aa25.36■■□□□ 1.65
PNKP-211ENST00000598020 CHRNDQ07001 517 aa25.36■■□□□ 1.65
PNKP-211ENST00000598020 COPRSQ9NQ92 184 aa25.36■■□□□ 1.65
PNKP-211ENST00000598020 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
PNKP-211ENST00000598020 GGA1Q9UJY5 639 aa25.36■■□□□ 1.65
PNKP-211ENST00000598020 SRGAP3O43295 1099 aa25.35■■□□□ 1.65
PNKP-211ENST00000598020 ATP8B2P98198 1209 aa25.35■■□□□ 1.65
PNKP-211ENST00000598020 KIAA2012Q0VF49 1180 aa25.35■■□□□ 1.65
PNKP-211ENST00000598020 PUS3Q9BZE2 481 aaKnown RBP25.35■■□□□ 1.65
PNKP-211ENST00000598020 LEMD3Q9Y2U8 911 aa25.35■■□□□ 1.65
PNKP-211ENST00000598020 KLHDC4Q8TBB5 520 aa25.34■■□□□ 1.65
PNKP-211ENST00000598020 EYA3Q99504 573 aa25.34■■□□□ 1.65
PNKP-211ENST00000598020 MROH5Q6ZUA9 1318 aa25.34■■□□□ 1.65
PNKP-211ENST00000598020 A0A1B0GUL6 1792 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 C6orf229H3BNL8 230 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 EYA2O00167 538 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 CIAO1O76071 339 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 UFL1O94874 794 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 C1orf115Q9H7X2 142 aa25.33■■□□□ 1.65
PNKP-211ENST00000598020 PNMA6EA0A0J9YXQ4 647 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 PPIP5K2O43314 1243 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 YY1P25490 414 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 POLA2Q14181 598 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 WASHC4Q2M389 1173 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 LRRC24Q50LG9 513 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 LARGE2Q8N3Y3 721 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 SSH3Q8TE77 659 aa25.32■■□□□ 1.64
PNKP-211ENST00000598020 AOC3Q16853 763 aa25.31■■□□□ 1.64
PNKP-211ENST00000598020 CEP85Q6P2H3 762 aa25.31■■□□□ 1.64
PNKP-211ENST00000598020 JDP2Q8WYK2 163 aa25.31■■□□□ 1.64
PNKP-211ENST00000598020 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
PNKP-211ENST00000598020 TIAM2Q8IVF5 1701 aa25.31■■□□□ 1.64
PNKP-211ENST00000598020 COL4A5P29400 1685 aa25.3■■□□□ 1.64
PNKP-211ENST00000598020 ATG9AQ7Z3C6 839 aa25.3■■□□□ 1.64
PNKP-211ENST00000598020 ZNF804BA4D1E1 1349 aa25.3■■□□□ 1.64
PNKP-211ENST00000598020 FZD9O00144 591 aa25.29■■□□□ 1.64
PNKP-211ENST00000598020 RPAP2Q8IXW5 612 aaPredicted RBP25.29■■□□□ 1.64
PNKP-211ENST00000598020 VGLL2Q8N8G2 317 aa25.29■■□□□ 1.64
PNKP-211ENST00000598020 ZC3H12CQ9C0D7 883 aaKnown RBP25.29■■□□□ 1.64
PNKP-211ENST00000598020 MED23Q9ULK4 1368 aa25.29■■□□□ 1.64
PNKP-211ENST00000598020 WTIPA6NIX2 430 aaPredicted RBP25.28■■□□□ 1.64
PNKP-211ENST00000598020 TAF5LO75529 589 aa25.28■■□□□ 1.64
PNKP-211ENST00000598020 C15orf52Q6ZUT6 534 aaKnown RBP25.28■■□□□ 1.64
PNKP-211ENST00000598020 HELBQ8NG08 1087 aaPredicted RBP25.28■■□□□ 1.64
PNKP-211ENST00000598020 PA2G4Q9UQ80 394 aaKnown RBP25.28■■□□□ 1.64
PNKP-211ENST00000598020 IL15P40933 162 aaPredicted RBP25.27■■□□□ 1.64
PNKP-211ENST00000598020 UBE4AQ14139 1066 aa25.27■■□□□ 1.64
PNKP-211ENST00000598020 NIM1KQ8IY84 436 aa25.27■■□□□ 1.64
PNKP-211ENST00000598020 PDE8BO95263 885 aa25.26■■□□□ 1.63
PNKP-211ENST00000598020 METTL24Q5JXM2 366 aa25.26■■□□□ 1.63
PNKP-211ENST00000598020 GPR101Q96P66 508 aaPredicted RBP25.26■■□□□ 1.63
PNKP-211ENST00000598020 ZNRF3Q9ULT6 936 aa25.26■■□□□ 1.63
PNKP-211ENST00000598020 IRS2Q9Y4H2 1338 aa25.26■■□□□ 1.63
PNKP-211ENST00000598020 RIMBP2O15034 1052 aa25.25■■□□□ 1.63
PNKP-211ENST00000598020 KCNJ4P48050 445 aa25.25■■□□□ 1.63
PNKP-211ENST00000598020 SIL1Q9H173 461 aa25.25■■□□□ 1.63
PNKP-211ENST00000598020 CRBNQ96SW2 442 aa25.24■■□□□ 1.63
PNKP-211ENST00000598020 NOP58Q9Y2X3 529 aaKnown RBP25.24■■□□□ 1.63
PNKP-211ENST00000598020 GLTPD2A6NH11 291 aa25.23■■□□□ 1.63
PNKP-211ENST00000598020 DPY19L2Q6NUT2 758 aa25.23■■□□□ 1.63
PNKP-211ENST00000598020 CEP126Q9P2H0 1117 aa25.23■■□□□ 1.63
PNKP-211ENST00000598020 SNAP23O00161 211 aa25.22■■□□□ 1.63
PNKP-211ENST00000598020 EIF6P56537 245 aaKnown RBP25.22■■□□□ 1.63
PNKP-211ENST00000598020 AAMPQ13685 434 aa25.22■■□□□ 1.63
PNKP-211ENST00000598020 TXNRD3Q86VQ6 643 aa25.22■■□□□ 1.63
PNKP-211ENST00000598020 SIRT2Q8IXJ6 389 aa25.22■■□□□ 1.63
PNKP-211ENST00000598020 HMMRO75330 724 aa25.21■■□□□ 1.63
PNKP-211ENST00000598020 FGFR2P21802 821 aa25.21■■□□□ 1.63
PNKP-211ENST00000598020 G3BP1Q13283 466 aaKnown RBP eCLIP25.21■■□□□ 1.63
PNKP-211ENST00000598020 PUM3Q15397 648 aaKnown RBP25.21■■□□□ 1.63
PNKP-211ENST00000598020 COA1Q9GZY4 146 aa25.21■■□□□ 1.63
PNKP-211ENST00000598020 DBNDD1Q9H9R9 158 aa25.21■■□□□ 1.63
PNKP-211ENST00000598020 ZNF541Q9H0D2 1346 aa25.2■■□□□ 1.62
PNKP-211ENST00000598020 YDJCA8MPS7 323 aa25.2■■□□□ 1.62
PNKP-211ENST00000598020 ECE2O60344 883 aa25.2■■□□□ 1.62
PNKP-211ENST00000598020 KLRK1P26718 216 aa25.2■■□□□ 1.62
PNKP-211ENST00000598020 DOK7Q18PE1 504 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms