RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 C6orf229H3BNL8 230 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 RIMBP2O15034 1052 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 GCKRQ14397 625 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 CIAPIN1Q6FI81 312 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 TBC1D16Q8TBP0 767 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 GPR101Q96P66 508 aaPredicted RBP19.54■□□□□ 0.72
XRCC1-206ENST00000597811 CREBZFQ9NS37 354 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 GPRC5DQ9NZD1 345 aa19.54■□□□□ 0.72
XRCC1-206ENST00000597811 PTPRCP08575 1304 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 H7C1W4 665 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 GMPSP49915 693 aaPredicted RBP19.53■□□□□ 0.72
XRCC1-206ENST00000597811 CNTROBQ8N137 903 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 TTLL11Q8NHH1 800 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 DBNDD1Q9H9R9 158 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
XRCC1-206ENST00000597811 BEND3Q5T5X7 828 aa19.52■□□□□ 0.72
XRCC1-206ENST00000597811 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
XRCC1-206ENST00000597811 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
XRCC1-206ENST00000597811 GREM2Q9H772 168 aa19.52■□□□□ 0.72
XRCC1-206ENST00000597811 C9orf78Q9NZ63 289 aaPredicted RBP19.52■□□□□ 0.72
XRCC1-206ENST00000597811 RARSP54136 660 aaKnown RBP19.51■□□□□ 0.71
XRCC1-206ENST00000597811 CASP7P55210 303 aa19.51■□□□□ 0.71
XRCC1-206ENST00000597811 TNIP1Q15025 636 aa19.51■□□□□ 0.71
XRCC1-206ENST00000597811 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
XRCC1-206ENST00000597811 EYA3Q99504 573 aa19.51■□□□□ 0.71
XRCC1-206ENST00000597811 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
XRCC1-206ENST00000597811 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
XRCC1-206ENST00000597811 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
XRCC1-206ENST00000597811 RTL9Q8NET4 1388 aa19.51■□□□□ 0.71
XRCC1-206ENST00000597811 ECE2O60344 883 aa19.5■□□□□ 0.71
XRCC1-206ENST00000597811 UFL1O94874 794 aa19.5■□□□□ 0.71
XRCC1-206ENST00000597811 DOK7Q18PE1 504 aa19.5■□□□□ 0.71
XRCC1-206ENST00000597811 POLR2AP24928 1970 aaKnown RBP19.5■□□□□ 0.71
XRCC1-206ENST00000597811 PSMD14O00487 310 aa19.49■□□□□ 0.71
XRCC1-206ENST00000597811 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
XRCC1-206ENST00000597811 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
XRCC1-206ENST00000597811 PLA2G12BQ9BX93 195 aa19.49■□□□□ 0.71
XRCC1-206ENST00000597811 KCNQ5Q9NR82 932 aa19.49■□□□□ 0.71
XRCC1-206ENST00000597811 MKRN1Q9UHC7 482 aaKnown RBP19.49■□□□□ 0.71
XRCC1-206ENST00000597811 GGA1Q9UJY5 639 aa19.49■□□□□ 0.71
XRCC1-206ENST00000597811 A0A1B0GUL6 1792 aa19.49■□□□□ 0.71
XRCC1-206ENST00000597811 SHTN1A0MZ66 631 aa19.48■□□□□ 0.71
XRCC1-206ENST00000597811 TMEM88BA6NKF7 163 aa19.48■□□□□ 0.71
XRCC1-206ENST00000597811 ALDH1L1O75891 902 aa19.48■□□□□ 0.71
XRCC1-206ENST00000597811 ZC3H12CQ9C0D7 883 aaKnown RBP19.48■□□□□ 0.71
XRCC1-206ENST00000597811 ZBTB12Q9Y330 459 aaPredicted RBP19.48■□□□□ 0.71
XRCC1-206ENST00000597811 XDHP47989 1333 aa19.48■□□□□ 0.71
XRCC1-206ENST00000597811 ZNF646O15015 1829 aaPredicted RBP19.47■□□□□ 0.71
XRCC1-206ENST00000597811 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.71
XRCC1-206ENST00000597811 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
XRCC1-206ENST00000597811 API5Q9BZZ5 524 aaKnown RBP19.47■□□□□ 0.71
XRCC1-206ENST00000597811 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
XRCC1-206ENST00000597811 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
XRCC1-206ENST00000597811 CNTNAP1P78357 1384 aa19.46■□□□□ 0.71
XRCC1-206ENST00000597811 GRM8O00222 908 aa19.46■□□□□ 0.71
XRCC1-206ENST00000597811 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
XRCC1-206ENST00000597811 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
XRCC1-206ENST00000597811 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
XRCC1-206ENST00000597811 CNOT7Q9UIV1 285 aaKnown RBP19.46■□□□□ 0.71
XRCC1-206ENST00000597811 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
XRCC1-206ENST00000597811 WTIPA6NIX2 430 aaPredicted RBP19.45■□□□□ 0.7
XRCC1-206ENST00000597811 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
XRCC1-206ENST00000597811 BCAR3O75815 825 aa19.45■□□□□ 0.7
XRCC1-206ENST00000597811 CSF1RP07333 972 aa19.45■□□□□ 0.7
XRCC1-206ENST00000597811 HIRAP54198 1017 aaPredicted RBP19.45■□□□□ 0.7
XRCC1-206ENST00000597811 IFFO2Q5TF58 517 aa19.45■□□□□ 0.7
XRCC1-206ENST00000597811 MICALL2Q8IY33 904 aa19.45■□□□□ 0.7
XRCC1-206ENST00000597811 TRAF5O00463 557 aa19.44■□□□□ 0.7
XRCC1-206ENST00000597811 ITGA6P23229 1130 aa19.44■□□□□ 0.7
XRCC1-206ENST00000597811 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
XRCC1-206ENST00000597811 DPF2Q92785 391 aa19.44■□□□□ 0.7
XRCC1-206ENST00000597811 H7C1D1 291 aa19.43■□□□□ 0.7
XRCC1-206ENST00000597811 G3V3G9 751 aa19.42■□□□□ 0.7
XRCC1-206ENST00000597811 IGHMBP2P38935 993 aaKnown RBP19.42■□□□□ 0.7
XRCC1-206ENST00000597811 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
XRCC1-206ENST00000597811 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
XRCC1-206ENST00000597811 FOXO4P98177 505 aa19.42■□□□□ 0.7
XRCC1-206ENST00000597811 DCAF8Q5TAQ9 597 aa19.42■□□□□ 0.7
XRCC1-206ENST00000597811 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
XRCC1-206ENST00000597811 MED23Q9ULK4 1368 aa19.42■□□□□ 0.7
XRCC1-206ENST00000597811 EGFRP00533 1210 aa19.41■□□□□ 0.7
XRCC1-206ENST00000597811 VIL1P09327 827 aaKnown RBP19.41■□□□□ 0.7
XRCC1-206ENST00000597811 HSPA1AP0DMV8 641 aaKnown RBP19.41■□□□□ 0.7
XRCC1-206ENST00000597811 HSPA1BP0DMV9 641 aaKnown RBP19.41■□□□□ 0.7
XRCC1-206ENST00000597811 RPS12P25398 132 aaKnown RBP19.41■□□□□ 0.7
XRCC1-206ENST00000597811 SAMD7Q7Z3H4 446 aa19.41■□□□□ 0.7
XRCC1-206ENST00000597811 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
XRCC1-206ENST00000597811 VEGFBP49765 207 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 TAF7LQ5H9L4 462 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 CST9Q5W186 159 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 LMBR1LQ6UX01 489 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
XRCC1-206ENST00000597811 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 GLIS2Q9BZE0 524 aaPredicted RBP19.4■□□□□ 0.7
XRCC1-206ENST00000597811 ABT1Q9ULW3 272 aaKnown RBP19.4■□□□□ 0.7
XRCC1-206ENST00000597811 ZNF609O15014 1411 aa19.4■□□□□ 0.7
XRCC1-206ENST00000597811 ANKRD18BA2A2Z9 1011 aa19.39■□□□□ 0.69
XRCC1-206ENST00000597811 RASSF10A6NK89 507 aa19.39■□□□□ 0.69
XRCC1-206ENST00000597811 IFIT5Q13325 482 aaKnown RBP19.39■□□□□ 0.69
XRCC1-206ENST00000597811 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms