RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, human

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-208	ENST00000597656	BRCA1	P38398	1863 aa	Known RBP	10.49	□□□□□ -0.73
KHSRP-208	ENST00000597656	CCDC57	Q2TAC2	916 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	ARHGAP27	Q6ZUM4	889 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	ANKRD18A	Q8IVF6	992 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	SP8	Q8IXZ3	490 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	CDC5L	Q99459	802 aa	Known RBP	10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	DDX19B	Q9UMR2	479 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	CHMP3	Q9Y3E7	222 aa		10.48	□□□□□ -0.73
KHSRP-208	ENST00000597656	SLX4	Q8IY92	1834 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	ANKRD18B	A2A2Z9	1011 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	NFKBIE	O00221	500 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	RFX5	P48382	616 aa	Predicted RBP	10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	MTX1	Q13505	466 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	CC2D2B	Q6DHV5	1058 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	TMC4	Q7Z404	712 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	GCC1	Q96CN9	775 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	ZNF594	Q96JF6	807 aa	Predicted RBP	10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	C1orf115	Q9H7X2	142 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	BSDC1	Q9NW68	430 aa	Predicted RBP	10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	SNED1	Q8TER0	1413 aa		10.47	□□□□□ -0.73
KHSRP-208	ENST00000597656	LBX1	P52954	281 aa		10.46	□□□□□ -0.73
KHSRP-208	ENST00000597656	CCDC93	Q567U6	631 aa		10.46	□□□□□ -0.73
KHSRP-208	ENST00000597656	SOGA3	Q5TF21	947 aa		10.46	□□□□□ -0.73
KHSRP-208	ENST00000597656	RTKN2	Q8IZC4	609 aa		10.46	□□□□□ -0.73
KHSRP-208	ENST00000597656	MINPP1	Q9UNW1	487 aa		10.46	□□□□□ -0.73
KHSRP-208	ENST00000597656	PNMA6E	A0A0J9YXQ4	647 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	SRGAP3	O43295	1099 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	IGHMBP2	P38935	993 aa	Known RBP	10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	PTPN12	Q05209	780 aa	Known RBP	10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	GRIPAP1	Q4V328	841 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	LDHAL6A	Q6ZMR3	332 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	KLHDC4	Q8TBB5	520 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	CRBN	Q96SW2	442 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	MPHOSPH8	Q99549	860 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	CHMP4B	Q9H444	224 aa	Known RBP	10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	RIPOR2	Q9Y4F9	1068 aa		10.45	□□□□□ -0.74
KHSRP-208	ENST00000597656	LTBP3	Q9NS15	1303 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	WTIP	A6NIX2	430 aa	Predicted RBP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	GPSM2	P81274	684 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	ATP8B2	P98198	1209 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	RASSF7	Q02833	373 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	POLA2	Q14181	598 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	TAF7L	Q5H9L4	462 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	CEP85	Q6P2H3	762 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	PSMD1	Q99460	953 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	PUS3	Q9BZE2	481 aa	Known RBP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	TMX4	Q9H1E5	349 aa	Predicted RBP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	PODXL2	Q9NZ53	605 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	TAF1	P21675	1872 aa		10.44	□□□□□ -0.74
KHSRP-208	ENST00000597656	ARFGEF1	Q9Y6D6	1849 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	CACNB1	Q02641	598 aa	Predicted RBP	10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	CHRND	Q07001	517 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	LRRC24	Q50LG9	513 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	DPP8	Q6V1X1	898 aa	Predicted RBP	10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	SIRT2	Q8IXJ6	389 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	SMC1B	Q8NDV3	1235 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	SSH3	Q8TE77	659 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	TAOK3	Q9H2K8	898 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	COPRS	Q9NQ92	184 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	CNNM1	Q9NRU3	951 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	ANKIB1	Q9P2G1	1089 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	POLL	Q9UGP5	575 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	PA2G4	Q9UQ80	394 aa	Known RBP	10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	MYH3	P11055	1940 aa		10.43	□□□□□ -0.74
KHSRP-208	ENST00000597656	LMNB1	P20700	586 aa		10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	ATG9A	Q7Z3C6	839 aa		10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	HELB	Q8NG08	1087 aa	Predicted RBP	10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	TBC1D16	Q8TBP0	767 aa		10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.42	□□□□□ -0.74
KHSRP-208	ENST00000597656	LRRC37A	A6NMS7	1700 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	XDH	P47989	1333 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	SNAP23	O00161	211 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	EYA2	O00167	538 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	TAF5L	O75529	589 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	CIAO1	O76071	339 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	SLC17A8	Q8NDX2	589 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	EXOC6	Q8TAG9	804 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	ANKRD2	Q9GZV1	360 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	SIL1	Q9H173	461 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	GGA1	Q9UJY5	639 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	FBXO3	Q9UK99	471 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	PCDHB15	Q9Y5E8	787 aa		10.41	□□□□□ -0.74
KHSRP-208	ENST00000597656	CACNA1S	Q13698	1873 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	DUOX1	Q9NRD9	1551 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	MROH5	Q6ZUA9	1318 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	C6orf229	H3BNL8	230 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	UFL1	O94874	794 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	CENPB	P07199	599 aa	Predicted RBP	10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	ATP2B4	P23634	1241 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	IARS	P41252	1262 aa	Known RBP	10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	IRX6	P78412	446 aa	Predicted RBP	10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	C9orf131	Q5VYM1	1079 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	VGLL2	Q8N8G2	317 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	SUPT20H	Q8NEM7	779 aa		10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	GPR101	Q96P66	508 aa	Predicted RBP	10.4	□□□□□ -0.74
KHSRP-208	ENST00000597656	VPS33B	Q9H267	617 aa		10.4	□□□□□ -0.74

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