RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CDCA5Q96FF9 252 aa14.4□□□□□ -0.1
ZNF548-207ENST00000597400 NSFL1CQ9UNZ2 370 aaKnown RBP14.4□□□□□ -0.1
ZNF548-207ENST00000597400 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
ZNF548-207ENST00000597400 TCIRG1Q13488 830 aa14.39□□□□□ -0.11
ZNF548-207ENST00000597400 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
ZNF548-207ENST00000597400 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
ZNF548-207ENST00000597400 ZNF609O15014 1411 aa14.39□□□□□ -0.11
ZNF548-207ENST00000597400 RPS12P25398 132 aaKnown RBP14.38□□□□□ -0.11
ZNF548-207ENST00000597400 TMC4Q7Z404 712 aa14.38□□□□□ -0.11
ZNF548-207ENST00000597400 SCAF8Q9UPN6 1271 aaKnown RBP14.38□□□□□ -0.11
ZNF548-207ENST00000597400 C6orf229H3BNL8 230 aa14.37□□□□□ -0.11
ZNF548-207ENST00000597400 HSP90AB3PQ58FF7 597 aa14.37□□□□□ -0.11
ZNF548-207ENST00000597400 MOB2Q70IA6 237 aa14.37□□□□□ -0.11
ZNF548-207ENST00000597400 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
ZNF548-207ENST00000597400 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
ZNF548-207ENST00000597400 ANGEL2Q5VTE6 544 aaKnown RBP14.36□□□□□ -0.11
ZNF548-207ENST00000597400 SULF1Q8IWU6 871 aa14.36□□□□□ -0.11
ZNF548-207ENST00000597400 ZNF296Q8WUU4 475 aaPredicted RBP14.36□□□□□ -0.11
ZNF548-207ENST00000597400 FAM89AQ96GI7 184 aa14.36□□□□□ -0.11
ZNF548-207ENST00000597400 MYH3P11055 1940 aa14.35□□□□□ -0.11
ZNF548-207ENST00000597400 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
ZNF548-207ENST00000597400 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
ZNF548-207ENST00000597400 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
ZNF548-207ENST00000597400 SZT2Q5T011 3432 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 ATP5J2-PTCD1G3V325 749 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 NEFMP07197 916 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 ZNF280AP59817 542 aaPredicted RBP14.34□□□□□ -0.11
ZNF548-207ENST00000597400 ISCA1Q9BUE6 129 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 CHPF2Q9P2E5 772 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 MAPK8IP3Q9UPT6 1336 aa14.34□□□□□ -0.11
ZNF548-207ENST00000597400 SCARF1Q14162 830 aa14.33□□□□□ -0.12
ZNF548-207ENST00000597400 GMLQ99445 158 aa14.33□□□□□ -0.12
ZNF548-207ENST00000597400 ECM29Q5VYK3 1845 aa14.33□□□□□ -0.12
ZNF548-207ENST00000597400 PRAMEF18Q5VWM3 479 aa14.32□□□□□ -0.12
ZNF548-207ENST00000597400 EYA3Q99504 573 aa14.32□□□□□ -0.12
ZNF548-207ENST00000597400 R3HDMLQ9H3Y0 253 aa14.32□□□□□ -0.12
ZNF548-207ENST00000597400 SEC31BQ9NQW1 1179 aa14.32□□□□□ -0.12
ZNF548-207ENST00000597400 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
ZNF548-207ENST00000597400 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
ZNF548-207ENST00000597400 UFL1O94874 794 aa14.31□□□□□ -0.12
ZNF548-207ENST00000597400 RIPK4P57078 832 aa14.31□□□□□ -0.12
ZNF548-207ENST00000597400 RSBN1LQ6PCB5 846 aaPredicted RBP14.31□□□□□ -0.12
ZNF548-207ENST00000597400 PLBD2Q8NHP8 589 aa14.31□□□□□ -0.12
ZNF548-207ENST00000597400 A0A1B0GUL6 1792 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 WTIPA6NIX2 430 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-207ENST00000597400 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
ZNF548-207ENST00000597400 FKBP1BP68106 108 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 MKRN3Q13064 507 aaKnown RBP14.3□□□□□ -0.12
ZNF548-207ENST00000597400 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-207ENST00000597400 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 BABAM1Q9NWV8 329 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 HDAC9Q9UKV0 1011 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 PITPNM2Q9BZ72 1349 aa14.3□□□□□ -0.12
ZNF548-207ENST00000597400 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
ZNF548-207ENST00000597400 GPR25O00155 361 aa14.29□□□□□ -0.12
ZNF548-207ENST00000597400 IRS4O14654 1257 aaPredicted RBP14.29□□□□□ -0.12
ZNF548-207ENST00000597400 PKN2Q16513 984 aaKnown RBP14.29□□□□□ -0.12
ZNF548-207ENST00000597400 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
ZNF548-207ENST00000597400 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
ZNF548-207ENST00000597400 ZC3H12CQ9C0D7 883 aaKnown RBP14.29□□□□□ -0.12
ZNF548-207ENST00000597400 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
ZNF548-207ENST00000597400 TM4SF4P48230 202 aa14.28□□□□□ -0.12
ZNF548-207ENST00000597400 KIAA0100Q14667 2235 aaKnown RBP14.28□□□□□ -0.12
ZNF548-207ENST00000597400 FBXO46Q6PJ61 603 aaPredicted RBP14.28□□□□□ -0.12
ZNF548-207ENST00000597400 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
ZNF548-207ENST00000597400 MXD3Q9BW11 206 aa14.28□□□□□ -0.12
ZNF548-207ENST00000597400 CHL1O00533 1208 aa14.27□□□□□ -0.13
ZNF548-207ENST00000597400 USP17L8P0C7I0 530 aa14.27□□□□□ -0.13
ZNF548-207ENST00000597400 NOM1Q5C9Z4 860 aaKnown RBP14.27□□□□□ -0.13
ZNF548-207ENST00000597400 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
ZNF548-207ENST00000597400 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
ZNF548-207ENST00000597400 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
ZNF548-207ENST00000597400 ANKIB1Q9P2G1 1089 aa14.26□□□□□ -0.13
ZNF548-207ENST00000597400 FZD1Q9UP38 647 aa14.26□□□□□ -0.13
ZNF548-207ENST00000597400 SSC5DA1L4H1 1573 aa14.26□□□□□ -0.13
ZNF548-207ENST00000597400 RANBP2P49792 3224 aaKnown RBP14.25□□□□□ -0.13
ZNF548-207ENST00000597400 POTEFA5A3E0 1075 aa14.25□□□□□ -0.13
ZNF548-207ENST00000597400 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
ZNF548-207ENST00000597400 HABP4Q5JVS0 413 aaKnown RBP14.25□□□□□ -0.13
ZNF548-207ENST00000597400 JARID2Q92833 1246 aaPredicted RBP14.25□□□□□ -0.13
ZNF548-207ENST00000597400 CFHR5Q9BXR6 569 aa14.25□□□□□ -0.13
ZNF548-207ENST00000597400 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
ZNF548-207ENST00000597400 XDHP47989 1333 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 USP17L3A6NCW0 530 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 USP17L4A6NCW7 530 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 WNT10BO00744 389 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
ZNF548-207ENST00000597400 USP17L1Q7RTZ2 530 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
ZNF548-207ENST00000597400 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
ZNF548-207ENST00000597400 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
ZNF548-207ENST00000597400 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
ZNF548-207ENST00000597400 G3V3G9 751 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 FKTNO75072 461 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 SASH1O94885 1247 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 PRKG1Q13976 671 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
ZNF548-207ENST00000597400 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 DACT2Q5SW24 774 aa14.23□□□□□ -0.13
ZNF548-207ENST00000597400 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms