RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 RBM46Q8TBY0 533 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-206ENST00000595523 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
SHKBP1-206ENST00000595523 ZNRF3Q9ULT6 936 aa13.9□□□□□ -0.18
SHKBP1-206ENST00000595523 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
SHKBP1-206ENST00000595523 XDHP47989 1333 aa13.9□□□□□ -0.19
SHKBP1-206ENST00000595523 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 BCAR3O75815 825 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 UFL1O94874 794 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 EIF6P56537 245 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 CXCL9Q07325 125 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
SHKBP1-206ENST00000595523 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 POTEJP0CG39 1038 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 SCNN1DP51172 638 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
SHKBP1-206ENST00000595523 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 ARHGAP45Q92619 1136 aa13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 API5Q9BZZ5 524 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 BICC1Q9H694 974 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 CHMP3Q9Y3E7 222 aa13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 POLR2AP24928 1970 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-206ENST00000595523 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 ECE2O60344 883 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 RAD17O75943 681 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 IFIT5Q13325 482 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 DOK7Q18PE1 504 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 EYA3Q99504 573 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 KCNQ5Q9NR82 932 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
SHKBP1-206ENST00000595523 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 TRIM27P14373 513 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 HSPA6P17066 643 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 CHRNDQ07001 517 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 FSTL1Q12841 308 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
SHKBP1-206ENST00000595523 PCNTO95613 3336 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 KLRK1P26718 216 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 EPHX2P34913 555 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 EPS15P42566 896 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 TXNRD3Q86VQ6 643 aa13.84□□□□□ -0.19
SHKBP1-206ENST00000595523 TRPM7Q96QT4 1865 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 SNAP23O00161 211 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 PSMD14O00487 310 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 GMPSP49915 693 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 GPRC5DQ9NZD1 345 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 ZNF804BA4D1E1 1349 aa13.83□□□□□ -0.2
SHKBP1-206ENST00000595523 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 TAF5LO75529 589 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 TNIP1Q15025 636 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 MEIS3Q99687 375 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 MYH13Q9UKX3 1938 aa13.82□□□□□ -0.2
SHKBP1-206ENST00000595523 ZNF609O15014 1411 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 IPO8O15397 1037 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 RFX5P48382 616 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 LDHAL6AQ6ZMR3 332 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
SHKBP1-206ENST00000595523 VIL1P09327 827 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 UBTFL1P0CB47 393 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 PNMA8AQ86V59 439 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 CNNM1Q9NRU3 951 aa13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
SHKBP1-206ENST00000595523 HTRA3P83110 453 aa13.79□□□□□ -0.2
SHKBP1-206ENST00000595523 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
SHKBP1-206ENST00000595523 C15orf52Q6ZUT6 534 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-206ENST00000595523 ADARB2Q9NS39 739 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms