RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
PDE4C-208ENST00000595343 CASP8AP2Q9UKL3 1982 aa24.17■■□□□ 1.46
PDE4C-208ENST00000595343 RBM26Q5T8P6 1007 aaKnown RBP24.17■■□□□ 1.46
PDE4C-208ENST00000595343 RIC3Q7Z5B4 369 aa24.17■■□□□ 1.46
PDE4C-208ENST00000595343 ZBTB38Q8NAP3 1195 aaPredicted RBP24.17■■□□□ 1.46
PDE4C-208ENST00000595343 DCPSQ96C86 337 aaKnown RBP24.16■■□□□ 1.46
PDE4C-208ENST00000595343 MCOLN1Q9GZU1 580 aa24.16■■□□□ 1.46
PDE4C-208ENST00000595343 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
PDE4C-208ENST00000595343 PODXL2Q9NZ53 605 aa24.16■■□□□ 1.46
PDE4C-208ENST00000595343 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
PDE4C-208ENST00000595343 ADM5C9JUS6 153 aa24.15■■□□□ 1.46
PDE4C-208ENST00000595343 ZNF853P0CG23 659 aa24.15■■□□□ 1.46
PDE4C-208ENST00000595343 RGS19P49795 217 aa24.15■■□□□ 1.46
PDE4C-208ENST00000595343 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
PDE4C-208ENST00000595343 RGMBQ6NW40 437 aa24.15■■□□□ 1.46
PDE4C-208ENST00000595343 ZC3H12CQ9C0D7 883 aaKnown RBP24.15■■□□□ 1.46
PDE4C-208ENST00000595343 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
PDE4C-208ENST00000595343 GBA2Q9HCG7 927 aaPredicted RBP24.15■■□□□ 1.46
PDE4C-208ENST00000595343 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
PDE4C-208ENST00000595343 C2orf69Q8N8R5 385 aa24.14■■□□□ 1.45
PDE4C-208ENST00000595343 FAM155AB1AL88 458 aaPredicted RBP24.13■■□□□ 1.45
PDE4C-208ENST00000595343 UFL1O94874 794 aa24.13■■□□□ 1.45
PDE4C-208ENST00000595343 HSP90B1P14625 803 aaKnown RBP24.13■■□□□ 1.45
PDE4C-208ENST00000595343 MLLT1Q03111 559 aaPredicted RBP24.13■■□□□ 1.45
PDE4C-208ENST00000595343 KIF4BQ2VIQ3 1234 aa24.13■■□□□ 1.45
PDE4C-208ENST00000595343 MYD88Q99836 296 aa24.13■■□□□ 1.45
PDE4C-208ENST00000595343 ANKIB1Q9P2G1 1089 aa24.13■■□□□ 1.45
PDE4C-208ENST00000595343 SCN9AQ15858 1988 aa24.12■■□□□ 1.45
PDE4C-208ENST00000595343 G3V3G9 751 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 ELL2O00472 640 aaPredicted RBP24.11■■□□□ 1.45
PDE4C-208ENST00000595343 DGKZQ13574 1117 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 DCAF8Q5TAQ9 597 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 CCDC191Q8NCU4 936 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 CCDC102AQ96A19 550 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 GGA3Q9NZ52 723 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 GGA1Q9UJY5 639 aa24.11■■□□□ 1.45
PDE4C-208ENST00000595343 PCCAP05165 728 aaPredicted RBP24.1■■□□□ 1.45
PDE4C-208ENST00000595343 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
PDE4C-208ENST00000595343 SULF1Q8IWU6 871 aa24.1■■□□□ 1.45
PDE4C-208ENST00000595343 IFT57Q9NWB7 429 aa24.1■■□□□ 1.45
PDE4C-208ENST00000595343 ASTN2O75129 1339 aaPredicted RBP24.1■■□□□ 1.45
PDE4C-208ENST00000595343 PDE8AO60658 829 aa24.09■■□□□ 1.45
PDE4C-208ENST00000595343 ZNF157P51786 506 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-208ENST00000595343 GNAI1P63096 354 aa24.09■■□□□ 1.45
PDE4C-208ENST00000595343 KIF23Q02241 960 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-208ENST00000595343 JARID2Q92833 1246 aaPredicted RBP24.09■■□□□ 1.45
PDE4C-208ENST00000595343 APAF1O14727 1248 aa24.08■■□□□ 1.45
PDE4C-208ENST00000595343 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.45
PDE4C-208ENST00000595343 CWC25Q9NXE8 425 aaPredicted RBP24.08■■□□□ 1.45
PDE4C-208ENST00000595343 ZNF280AP59817 542 aaPredicted RBP24.07■■□□□ 1.44
PDE4C-208ENST00000595343 RSBN1LQ6PCB5 846 aaPredicted RBP24.07■■□□□ 1.44
PDE4C-208ENST00000595343 AGBL3Q8NEM8 1001 aa24.07■■□□□ 1.44
PDE4C-208ENST00000595343 SAGE1Q9NXZ1 904 aa24.07■■□□□ 1.44
PDE4C-208ENST00000595343 CALD1Q05682 793 aaKnown RBP24.06■■□□□ 1.44
PDE4C-208ENST00000595343 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
PDE4C-208ENST00000595343 CDCA5Q96FF9 252 aa24.06■■□□□ 1.44
PDE4C-208ENST00000595343 METTL22Q9BUU2 404 aaPredicted RBP24.06■■□□□ 1.44
PDE4C-208ENST00000595343 ZNF609O15014 1411 aa24.06■■□□□ 1.44
PDE4C-208ENST00000595343 SLC10A3P09131 477 aa24.05■■□□□ 1.44
PDE4C-208ENST00000595343 SCARF1Q14162 830 aa24.05■■□□□ 1.44
PDE4C-208ENST00000595343 ANKRD18AQ8IVF6 992 aa24.05■■□□□ 1.44
PDE4C-208ENST00000595343 XDHP47989 1333 aa24.05■■□□□ 1.44
PDE4C-208ENST00000595343 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
PDE4C-208ENST00000595343 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
PDE4C-208ENST00000595343 GMLQ99445 158 aa24.04■■□□□ 1.44
PDE4C-208ENST00000595343 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
PDE4C-208ENST00000595343 RNF186Q9NXI6 227 aa24.04■■□□□ 1.44
PDE4C-208ENST00000595343 TRPA1O75762 1119 aa24.03■■□□□ 1.44
PDE4C-208ENST00000595343 USP17L8P0C7I0 530 aa24.02■■□□□ 1.44
PDE4C-208ENST00000595343 ATP2B4P23634 1241 aa24.02■■□□□ 1.44
PDE4C-208ENST00000595343 CCDC30Q5VVM6 783 aa24.02■■□□□ 1.44
PDE4C-208ENST00000595343 CSRNP1Q96S65 589 aa24.02■■□□□ 1.44
PDE4C-208ENST00000595343 PSME4Q14997 1843 aa24.02■■□□□ 1.44
PDE4C-208ENST00000595343 SLC34A2O95436 690 aa24.01■■□□□ 1.43
PDE4C-208ENST00000595343 PODNQ7Z5L7 613 aa24.01■■□□□ 1.43
PDE4C-208ENST00000595343 CHMP4AQ9BY43 222 aa24.01■■□□□ 1.43
PDE4C-208ENST00000595343 MYOZ2Q9NPC6 264 aa24.01■■□□□ 1.43
PDE4C-208ENST00000595343 MAP3K2Q9Y2U5 619 aa24.01■■□□□ 1.43
PDE4C-208ENST00000595343 USP17L3A6NCW0 530 aa24■■□□□ 1.43
PDE4C-208ENST00000595343 USP17L4A6NCW7 530 aa24■■□□□ 1.43
PDE4C-208ENST00000595343 CTSWP56202 376 aa24■■□□□ 1.43
PDE4C-208ENST00000595343 USP17L1Q7RTZ2 530 aa24■■□□□ 1.43
PDE4C-208ENST00000595343 CDC5LQ99459 802 aaKnown RBP24■■□□□ 1.43
PDE4C-208ENST00000595343 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
PDE4C-208ENST00000595343 RASAL3Q86YV0 1011 aa23.99■■□□□ 1.43
PDE4C-208ENST00000595343 TSPYL6Q8N831 410 aa23.99■■□□□ 1.43
PDE4C-208ENST00000595343 PITPNM2Q9BZ72 1349 aa23.99■■□□□ 1.43
PDE4C-208ENST00000595343 AKAP11Q9UKA4 1901 aa23.98■■□□□ 1.43
PDE4C-208ENST00000595343 IGKV5-2P06315 115 aa23.98■■□□□ 1.43
PDE4C-208ENST00000595343 FKBP1BP68106 108 aa23.98■■□□□ 1.43
PDE4C-208ENST00000595343 KSR2Q6VAB6 950 aa23.98■■□□□ 1.43
PDE4C-208ENST00000595343 TTLL11Q8NHH1 800 aa23.98■■□□□ 1.43
PDE4C-208ENST00000595343 PI4KAP2A4QPH2 592 aa23.97■■□□□ 1.43
PDE4C-208ENST00000595343 REM2Q8IYK8 340 aaPredicted RBP23.97■■□□□ 1.43
PDE4C-208ENST00000595343 PI4KAP1Q8N8J0 262 aa23.97■■□□□ 1.43
PDE4C-208ENST00000595343 BSDC1Q9NW68 430 aaPredicted RBP23.97■■□□□ 1.43
PDE4C-208ENST00000595343 MED23Q9ULK4 1368 aa23.97■■□□□ 1.43
PDE4C-208ENST00000595343 MINPP1Q9UNW1 487 aa23.97■■□□□ 1.43
PDE4C-208ENST00000595343 GREM2Q9H772 168 aa23.96■■□□□ 1.43
PDE4C-208ENST00000595343 SCAF8Q9UPN6 1271 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms