RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 FKBP1BP68106 108 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 GPSM2P81274 684 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
SMG9-202ENST00000594081 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
SMG9-202ENST00000594081 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 EYA3Q99504 573 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 POLLQ9UGP5 575 aa11.18□□□□□ -0.62
SMG9-202ENST00000594081 RBBP6Q7Z6E9 1792 aaKnown RBP11.18□□□□□ -0.62
SMG9-202ENST00000594081 ZNF646O15015 1829 aaPredicted RBP11.17□□□□□ -0.62
SMG9-202ENST00000594081 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
SMG9-202ENST00000594081 AIMP1Q12904 312 aaKnown RBP11.17□□□□□ -0.62
SMG9-202ENST00000594081 TCIRG1Q13488 830 aa11.17□□□□□ -0.62
SMG9-202ENST00000594081 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
SMG9-202ENST00000594081 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
SMG9-202ENST00000594081 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
SMG9-202ENST00000594081 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
SMG9-202ENST00000594081 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
SMG9-202ENST00000594081 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
SMG9-202ENST00000594081 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
SMG9-202ENST00000594081 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
SMG9-202ENST00000594081 TBC1D16Q8TBP0 767 aa11.16□□□□□ -0.62
SMG9-202ENST00000594081 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
SMG9-202ENST00000594081 PITPNM2Q9BZ72 1349 aa11.15□□□□□ -0.62
SMG9-202ENST00000594081 ZNF280AP59817 542 aaPredicted RBP11.15□□□□□ -0.62
SMG9-202ENST00000594081 SCARF1Q14162 830 aa11.15□□□□□ -0.62
SMG9-202ENST00000594081 SF3B3Q15393 1217 aaKnown RBP11.15□□□□□ -0.62
SMG9-202ENST00000594081 LAMB1P07942 1786 aa11.15□□□□□ -0.62
SMG9-202ENST00000594081 GPR25O00155 361 aa11.14□□□□□ -0.63
SMG9-202ENST00000594081 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
SMG9-202ENST00000594081 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
SMG9-202ENST00000594081 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
SMG9-202ENST00000594081 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
SMG9-202ENST00000594081 SCAF8Q9UPN6 1271 aaKnown RBP11.14□□□□□ -0.63
SMG9-202ENST00000594081 G3V3G9 751 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 UFL1O94874 794 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 ZC3H12CQ9C0D7 883 aaKnown RBP11.13□□□□□ -0.63
SMG9-202ENST00000594081 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 SPEF2Q9C093 1822 aa11.13□□□□□ -0.63
SMG9-202ENST00000594081 TM4SF4P48230 202 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 SREBF2Q12772 1141 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
SMG9-202ENST00000594081 RTL5Q5HYW3 569 aaPredicted RBP11.12□□□□□ -0.63
SMG9-202ENST00000594081 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 ISCA1Q9BUE6 129 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 CHPF2Q9P2E5 772 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 HTTP42858 3142 aa11.12□□□□□ -0.63
SMG9-202ENST00000594081 ATP5J2-PTCD1G3V325 749 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
SMG9-202ENST00000594081 FKTNO75072 461 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
SMG9-202ENST00000594081 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
SMG9-202ENST00000594081 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 GMLQ99445 158 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 BABAM1Q9NWV8 329 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 ANKIB1Q9P2G1 1089 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 GGA1Q9UJY5 639 aa11.11□□□□□ -0.63
SMG9-202ENST00000594081 NF2P35240 595 aa11.1□□□□□ -0.63
SMG9-202ENST00000594081 R3HDMLQ9H3Y0 253 aa11.1□□□□□ -0.63
SMG9-202ENST00000594081 SEC31BQ9NQW1 1179 aa11.1□□□□□ -0.63
SMG9-202ENST00000594081 MKI67P46013 3256 aaKnown RBP11.1□□□□□ -0.63
SMG9-202ENST00000594081 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
SMG9-202ENST00000594081 RIPK4P57078 832 aa11.09□□□□□ -0.63
SMG9-202ENST00000594081 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
SMG9-202ENST00000594081 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
SMG9-202ENST00000594081 XDHP47989 1333 aa11.09□□□□□ -0.63
SMG9-202ENST00000594081 ECM29Q5VYK3 1845 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 FXR1P51114 621 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG9-202ENST00000594081 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
SMG9-202ENST00000594081 MYH3P11055 1940 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 COL1A1P02452 1464 aaPredicted RBP11.07□□□□□ -0.64
SMG9-202ENST00000594081 MED23Q9ULK4 1368 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 BRCA2P51587 3418 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 WNT10BO00744 389 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 PTPN12Q05209 780 aaKnown RBP11.07□□□□□ -0.64
SMG9-202ENST00000594081 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
SMG9-202ENST00000594081 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
SMG9-202ENST00000594081 ZBTB38Q8NAP3 1195 aaPredicted RBP11.07□□□□□ -0.64
SMG9-202ENST00000594081 SASH1O94885 1247 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 PRKG1Q13976 671 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
SMG9-202ENST00000594081 PODNQ7Z5L7 613 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms