RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
DDX39A-221ENST00000593026 CHMP4BQ9H444 224 aaKnown RBP18.65■□□□□ 0.58
DDX39A-221ENST00000593026 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-221ENST00000593026 RNF181Q9P0P0 153 aa18.65■□□□□ 0.58
DDX39A-221ENST00000593026 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
DDX39A-221ENST00000593026 DUOX1Q9NRD9 1551 aa18.64■□□□□ 0.58
DDX39A-221ENST00000593026 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 PRELPP51888 382 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 MTX1Q13505 466 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 RTFDC1Q9BY42 306 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-221ENST00000593026 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 XDHP47989 1333 aa18.64■□□□□ 0.57
DDX39A-221ENST00000593026 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
DDX39A-221ENST00000593026 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
DDX39A-221ENST00000593026 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
DDX39A-221ENST00000593026 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
DDX39A-221ENST00000593026 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-221ENST00000593026 KLHDC4Q8TBB5 520 aa18.62■□□□□ 0.57
DDX39A-221ENST00000593026 ANKRD2Q9GZV1 360 aa18.62■□□□□ 0.57
DDX39A-221ENST00000593026 GGA1Q9UJY5 639 aa18.62■□□□□ 0.57
DDX39A-221ENST00000593026 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
DDX39A-221ENST00000593026 TIAM2Q8IVF5 1701 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 UFL1O94874 794 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
DDX39A-221ENST00000593026 CHRNDQ07001 517 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 TBC1D16Q8TBP0 767 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 PUS3Q9BZE2 481 aaKnown RBP18.61■□□□□ 0.57
DDX39A-221ENST00000593026 ZBTB40Q9NUA8 1239 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
DDX39A-221ENST00000593026 PPIP5K2O43314 1243 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 ATP2B4P23634 1241 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 AOC3Q16853 763 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 EYA3Q99504 573 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 DICER1Q9UPY3 1922 aaKnown RBP18.6■□□□□ 0.57
DDX39A-221ENST00000593026 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
DDX39A-221ENST00000593026 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
DDX39A-221ENST00000593026 WASHC4Q2M389 1173 aa18.59■□□□□ 0.57
DDX39A-221ENST00000593026 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
DDX39A-221ENST00000593026 HELBQ8NG08 1087 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-221ENST00000593026 LEMD3Q9Y2U8 911 aa18.59■□□□□ 0.57
DDX39A-221ENST00000593026 MROH5Q6ZUA9 1318 aa18.58■□□□□ 0.57
DDX39A-221ENST00000593026 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.57
DDX39A-221ENST00000593026 EYA2O00167 538 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 ATP8B2P98198 1209 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 JDP2Q8WYK2 163 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 SIL1Q9H173 461 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 COPRSQ9NQ92 184 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 FBXO3Q9UK99 471 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 PA2G4Q9UQ80 394 aaKnown RBP18.58■□□□□ 0.56
DDX39A-221ENST00000593026 RIPOR2Q9Y4F9 1068 aa18.58■□□□□ 0.56
DDX39A-221ENST00000593026 TAF5LO75529 589 aa18.57■□□□□ 0.56
DDX39A-221ENST00000593026 KCNJ4P48050 445 aa18.57■□□□□ 0.56
DDX39A-221ENST00000593026 METTL24Q5JXM2 366 aa18.57■□□□□ 0.56
DDX39A-221ENST00000593026 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
DDX39A-221ENST00000593026 GPR101Q96P66 508 aaPredicted RBP18.57■□□□□ 0.56
DDX39A-221ENST00000593026 ZNF804BA4D1E1 1349 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 CIAO1O76071 339 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 POLA2Q14181 598 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 NIM1KQ8IY84 436 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 CRBNQ96SW2 442 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
DDX39A-221ENST00000593026 COL4A5P29400 1685 aa18.56■□□□□ 0.56
DDX39A-221ENST00000593026 WTIPA6NIX2 430 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-221ENST00000593026 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
DDX39A-221ENST00000593026 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
DDX39A-221ENST00000593026 IL15P40933 162 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-221ENST00000593026 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-221ENST00000593026 G3V3G9 751 aa18.53■□□□□ 0.56
DDX39A-221ENST00000593026 SNAP23O00161 211 aa18.53■□□□□ 0.56
DDX39A-221ENST00000593026 PDE8BO95263 885 aa18.53■□□□□ 0.56
DDX39A-221ENST00000593026 DCAF8Q5TAQ9 597 aa18.53■□□□□ 0.56
DDX39A-221ENST00000593026 VGLL2Q8N8G2 317 aa18.53■□□□□ 0.56
DDX39A-221ENST00000593026 FZD9O00144 591 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 HMMRO75330 724 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX39A-221ENST00000593026 UBE4AQ14139 1066 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 DBNDD1Q9H9R9 158 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 ZNRF3Q9ULT6 936 aa18.52■□□□□ 0.56
DDX39A-221ENST00000593026 ECE2O60344 883 aa18.51■□□□□ 0.55
DDX39A-221ENST00000593026 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
DDX39A-221ENST00000593026 KLRK1P26718 216 aa18.51■□□□□ 0.55
DDX39A-221ENST00000593026 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
DDX39A-221ENST00000593026 PUM3Q15397 648 aaKnown RBP18.51■□□□□ 0.55
DDX39A-221ENST00000593026 DOK7Q18PE1 504 aa18.51■□□□□ 0.55
DDX39A-221ENST00000593026 DPY19L2Q6NUT2 758 aa18.51■□□□□ 0.55
DDX39A-221ENST00000593026 ZNF541Q9H0D2 1346 aa18.5■□□□□ 0.55
DDX39A-221ENST00000593026 OS9Q13438 667 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-221ENST00000593026 C15orf52Q6ZUT6 534 aaKnown RBP18.5■□□□□ 0.55
DDX39A-221ENST00000593026 TXNRD3Q86VQ6 643 aa18.5■□□□□ 0.55
DDX39A-221ENST00000593026 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
DDX39A-221ENST00000593026 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-221ENST00000593026 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms