RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 HSPA6P17066 643 aa28.29■■■□□ 2.12
MBD3-208ENST00000590830 TAF1DQ9H5J8 278 aaPredicted RBP28.29■■■□□ 2.12
MBD3-208ENST00000590830 ANKIB1Q9P2G1 1089 aa28.29■■■□□ 2.12
MBD3-208ENST00000590830 FSTL1Q12841 308 aa28.28■■■□□ 2.12
MBD3-208ENST00000590830 LMBR1LQ6UX01 489 aa28.28■■■□□ 2.12
MBD3-208ENST00000590830 SUCLG2Q96I99 432 aa28.28■■■□□ 2.12
MBD3-208ENST00000590830 UFL1O94874 794 aa28.27■■■□□ 2.12
MBD3-208ENST00000590830 GGA1Q9UJY5 639 aa28.27■■■□□ 2.12
MBD3-208ENST00000590830 MYH3P11055 1940 aa28.27■■■□□ 2.12
MBD3-208ENST00000590830 IQCA1LA6NCM1 817 aa28.26■■■□□ 2.11
MBD3-208ENST00000590830 DOK7Q18PE1 504 aa28.26■■■□□ 2.11
MBD3-208ENST00000590830 HACL1Q9UJ83 578 aa28.26■■■□□ 2.11
MBD3-208ENST00000590830 XDHP47989 1333 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 RAD17O75943 681 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 IGHMBP2P38935 993 aaKnown RBP28.25■■■□□ 2.11
MBD3-208ENST00000590830 SCNN1DP51172 638 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 SMC1BQ8NDV3 1235 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 EYA3Q99504 573 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 USP44Q9H0E7 712 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 DBNDD1Q9H9R9 158 aa28.25■■■□□ 2.11
MBD3-208ENST00000590830 ANKRD18BA2A2Z9 1011 aa28.24■■■□□ 2.11
MBD3-208ENST00000590830 KCNQ5Q9NR82 932 aa28.24■■■□□ 2.11
MBD3-208ENST00000590830 ATP2B4P23634 1241 aa28.23■■■□□ 2.11
MBD3-208ENST00000590830 EPHX2P34913 555 aa28.23■■■□□ 2.11
MBD3-208ENST00000590830 CIAPIN1Q6FI81 312 aa28.23■■■□□ 2.11
MBD3-208ENST00000590830 ZC3H12CQ9C0D7 883 aaKnown RBP28.23■■■□□ 2.11
MBD3-208ENST00000590830 CHMP3Q9Y3E7 222 aa28.23■■■□□ 2.11
MBD3-208ENST00000590830 EPS15P42566 896 aa28.22■■■□□ 2.11
MBD3-208ENST00000590830 IFIT5Q13325 482 aaKnown RBP28.22■■■□□ 2.11
MBD3-208ENST00000590830 ZBED9Q6R2W3 1325 aa28.21■■■□□ 2.11
MBD3-208ENST00000590830 BCAR3O75815 825 aa28.21■■■□□ 2.11
MBD3-208ENST00000590830 ZNF594Q96JF6 807 aaPredicted RBP28.21■■■□□ 2.11
MBD3-208ENST00000590830 MPHOSPH8Q99549 860 aa28.21■■■□□ 2.11
MBD3-208ENST00000590830 ECE2O60344 883 aa28.2■■■□□ 2.1
MBD3-208ENST00000590830 SCN4AP35499 1836 aa28.2■■■□□ 2.1
MBD3-208ENST00000590830 GMPSP49915 693 aaPredicted RBP28.19■■■□□ 2.1
MBD3-208ENST00000590830 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
MBD3-208ENST00000590830 TNIP1Q15025 636 aa28.19■■■□□ 2.1
MBD3-208ENST00000590830 ANKRD44Q8N8A2 993 aa28.19■■■□□ 2.1
MBD3-208ENST00000590830 API5Q9BZZ5 524 aaKnown RBP28.19■■■□□ 2.1
MBD3-208ENST00000590830 BICC1Q9H694 974 aaKnown RBP28.19■■■□□ 2.1
MBD3-208ENST00000590830 RABL6Q3YEC7 729 aaPredicted RBP28.18■■■□□ 2.1
MBD3-208ENST00000590830 EAPPQ56P03 285 aaPredicted RBP28.18■■■□□ 2.1
MBD3-208ENST00000590830 CHADLQ6NUI6 762 aa28.18■■■□□ 2.1
MBD3-208ENST00000590830 ARHGAP45Q92619 1136 aa28.18■■■□□ 2.1
MBD3-208ENST00000590830 PSMD14O00487 310 aa28.17■■■□□ 2.1
MBD3-208ENST00000590830 CHRNDQ07001 517 aa28.17■■■□□ 2.1
MBD3-208ENST00000590830 CCDC57Q2TAC2 916 aa28.17■■■□□ 2.1
MBD3-208ENST00000590830 LDHDQ86WU2 507 aa28.17■■■□□ 2.1
MBD3-208ENST00000590830 GPRC5DQ9NZD1 345 aa28.17■■■□□ 2.1
MBD3-208ENST00000590830 CEP350Q5VT06 3117 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 SPEF2Q9C093 1822 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 TXNRD3Q86VQ6 643 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 ANKRD2Q9GZV1 360 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 TNNQ9UQP3 1299 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 LEMD3Q9Y2U8 911 aa28.16■■■□□ 2.1
MBD3-208ENST00000590830 ZBTB12Q9Y330 459 aaPredicted RBP28.16■■■□□ 2.1
MBD3-208ENST00000590830 SNAP23O00161 211 aa28.15■■■□□ 2.1
MBD3-208ENST00000590830 LMOD1P29536 600 aaPredicted RBP28.15■■■□□ 2.1
MBD3-208ENST00000590830 PNMA8AQ86V59 439 aaPredicted RBP28.15■■■□□ 2.1
MBD3-208ENST00000590830 HELBQ8NG08 1087 aaPredicted RBP28.15■■■□□ 2.1
MBD3-208ENST00000590830 SHTN1A0MZ66 631 aa28.14■■■□□ 2.1
MBD3-208ENST00000590830 KLRK1P26718 216 aa28.14■■■□□ 2.1
MBD3-208ENST00000590830 APLP1P51693 650 aa28.14■■■□□ 2.1
MBD3-208ENST00000590830 ZNF804BA4D1E1 1349 aa28.14■■■□□ 2.09
MBD3-208ENST00000590830 KIF16BQ96L93 1317 aa28.14■■■□□ 2.09
MBD3-208ENST00000590830 TAF5LO75529 589 aa28.13■■■□□ 2.09
MBD3-208ENST00000590830 HTRA3P83110 453 aa28.13■■■□□ 2.09
MBD3-208ENST00000590830 LDHAL6AQ6ZMR3 332 aa28.13■■■□□ 2.09
MBD3-208ENST00000590830 CLEC11AQ9Y240 323 aa28.13■■■□□ 2.09
MBD3-208ENST00000590830 MED23Q9ULK4 1368 aa28.12■■■□□ 2.09
MBD3-208ENST00000590830 TAF7LQ5H9L4 462 aa28.12■■■□□ 2.09
MBD3-208ENST00000590830 PUS3Q9BZE2 481 aaKnown RBP28.12■■■□□ 2.09
MBD3-208ENST00000590830 G3V3G9 751 aa28.11■■■□□ 2.09
MBD3-208ENST00000590830 VIL1P09327 827 aaKnown RBP28.11■■■□□ 2.09
MBD3-208ENST00000590830 DCAF8Q5TAQ9 597 aa28.11■■■□□ 2.09
MBD3-208ENST00000590830 INTS3Q68E01 1043 aaKnown RBP28.11■■■□□ 2.09
MBD3-208ENST00000590830 FRAT1Q92837 279 aaPredicted RBP28.11■■■□□ 2.09
MBD3-208ENST00000590830 CNOT7Q9UIV1 285 aaKnown RBP28.11■■■□□ 2.09
MBD3-208ENST00000590830 ADAMTSL1Q8N6G6 1762 aa28.1■■■□□ 2.09
MBD3-208ENST00000590830 ITGBL1O95965 494 aaPredicted RBP28.1■■■□□ 2.09
MBD3-208ENST00000590830 TRIM27P14373 513 aa28.1■■■□□ 2.09
MBD3-208ENST00000590830 USP50Q70EL3 339 aaPredicted RBP28.1■■■□□ 2.09
MBD3-208ENST00000590830 CNNM1Q9NRU3 951 aa28.1■■■□□ 2.09
MBD3-208ENST00000590830 ADARB2Q9NS39 739 aaKnown RBP28.1■■■□□ 2.09
MBD3-208ENST00000590830 IRS2Q9Y4H2 1338 aa28.1■■■□□ 2.09
MBD3-208ENST00000590830 IPO8O15397 1037 aaKnown RBP28.09■■■□□ 2.09
MBD3-208ENST00000590830 MAP1SQ66K74 1059 aaPredicted RBP28.09■■■□□ 2.09
MBD3-208ENST00000590830 ATF7IPQ6VMQ6 1270 aa28.09■■■□□ 2.09
MBD3-208ENST00000590830 DPF2Q92785 391 aa28.09■■■□□ 2.09
MBD3-208ENST00000590830 SCN9AQ15858 1988 aa28.09■■■□□ 2.09
MBD3-208ENST00000590830 HIRAP54198 1017 aaPredicted RBP28.08■■■□□ 2.09
MBD3-208ENST00000590830 PODNQ7Z5L7 613 aa28.08■■■□□ 2.09
MBD3-208ENST00000590830 DNAJC5GQ8N7S2 189 aa28.08■■■□□ 2.09
MBD3-208ENST00000590830 RIPOR2Q9Y4F9 1068 aa28.08■■■□□ 2.09
MBD3-208ENST00000590830 PLIN1O60240 522 aa28.07■■■□□ 2.08
MBD3-208ENST00000590830 MICALL2Q8IY33 904 aa28.07■■■□□ 2.08
MBD3-208ENST00000590830 KLHDC4Q8TBB5 520 aa28.07■■■□□ 2.08
MBD3-208ENST00000590830 MEIS3Q99687 375 aa28.07■■■□□ 2.08
MBD3-208ENST00000590830 UBTFL1P0CB47 393 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms