RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
APOC1-206ENST00000590334 SBF1O95248 1867 aa14.98□□□□□ -0.01
APOC1-206ENST00000590334 EYA2O00167 538 aa14.98□□□□□ -0.01
APOC1-206ENST00000590334 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
APOC1-206ENST00000590334 ATG9AQ7Z3C6 839 aa14.98□□□□□ -0.01
APOC1-206ENST00000590334 PUS3Q9BZE2 481 aaKnown RBP14.98□□□□□ -0.01
APOC1-206ENST00000590334 MINPP1Q9UNW1 487 aa14.98□□□□□ -0.01
APOC1-206ENST00000590334 PA2G4Q9UQ80 394 aaKnown RBP14.98□□□□□ -0.01
APOC1-206ENST00000590334 MROH5Q6ZUA9 1318 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 SOGA3Q5TF21 947 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 CNNM1Q9NRU3 951 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 BCS1LQ9Y276 419 aa14.97□□□□□ -0.01
APOC1-206ENST00000590334 DICER1Q9UPY3 1922 aaKnown RBP14.97□□□□□ -0.01
APOC1-206ENST00000590334 C21orf2O43822 256 aa14.96□□□□□ -0.01
APOC1-206ENST00000590334 IL15P40933 162 aaPredicted RBP14.96□□□□□ -0.01
APOC1-206ENST00000590334 SLC51AQ86UW1 340 aa14.96□□□□□ -0.01
APOC1-206ENST00000590334 SIL1Q9H173 461 aa14.96□□□□□ -0.01
APOC1-206ENST00000590334 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
APOC1-206ENST00000590334 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
APOC1-206ENST00000590334 CHRNDQ07001 517 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 CCDC93Q567U6 631 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 HSP90AB4PQ58FF6 505 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 OLFM4Q6UX06 510 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 RTKN2Q8IZC4 609 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 ANKRD2Q9GZV1 360 aa14.95□□□□□ -0.02
APOC1-206ENST00000590334 TMX4Q9H1E5 349 aaPredicted RBP14.95□□□□□ -0.02
APOC1-206ENST00000590334 RWDD1Q9H446 243 aaPredicted RBP14.95□□□□□ -0.02
APOC1-206ENST00000590334 XDHP47989 1333 aa14.94□□□□□ -0.02
APOC1-206ENST00000590334 SASH1O94885 1247 aa14.94□□□□□ -0.02
APOC1-206ENST00000590334 YBX3P16989 372 aaKnown RBP eCLIP14.94□□□□□ -0.02
APOC1-206ENST00000590334 GPSM2P81274 684 aa14.94□□□□□ -0.02
APOC1-206ENST00000590334 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
APOC1-206ENST00000590334 RTFDC1Q9BY42 306 aaPredicted RBP14.94□□□□□ -0.02
APOC1-206ENST00000590334 WWC3Q9ULE0 1092 aa14.94□□□□□ -0.02
APOC1-206ENST00000590334 LTBP3Q9NS15 1303 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 RAB11FIP3O75154 756 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 PDE8BO95263 885 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 IGHDP01880 384 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 MPNDQ8N594 471 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 PSMD1Q99460 953 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
APOC1-206ENST00000590334 EXOC6BQ9Y2D4 811 aa14.93□□□□□ -0.02
APOC1-206ENST00000590334 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 DPP8Q6V1X1 898 aaPredicted RBP14.92□□□□□ -0.02
APOC1-206ENST00000590334 GCC1Q96CN9 775 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 ANKIB1Q9P2G1 1089 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 CEP126Q9P2H0 1117 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 NSFL1CQ9UNZ2 370 aaKnown RBP14.92□□□□□ -0.02
APOC1-206ENST00000590334 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 PSME4Q14997 1843 aa14.92□□□□□ -0.02
APOC1-206ENST00000590334 ATP2B4P23634 1241 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 FKBP4Q02790 459 aaKnown RBP eCLIP14.91□□□□□ -0.02
APOC1-206ENST00000590334 TFCP2Q12800 502 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 HELBQ8NG08 1087 aaPredicted RBP14.91□□□□□ -0.02
APOC1-206ENST00000590334 TBC1D16Q8TBP0 767 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 GPR108Q9NPR9 543 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 POLLQ9UGP5 575 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 GGA1Q9UJY5 639 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 CHD4Q14839 1912 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 ZNF609O15014 1411 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
APOC1-206ENST00000590334 ZNF646O15015 1829 aaPredicted RBP14.9□□□□□ -0.02
APOC1-206ENST00000590334 TIAM2Q8IVF5 1701 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 NFKBIEO00221 500 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 TAF5LO75529 589 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 FGFR2P21802 821 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 OS9Q13438 667 aaPredicted RBP14.9□□□□□ -0.02
APOC1-206ENST00000590334 C15orf52Q6ZUT6 534 aaKnown RBP14.9□□□□□ -0.02
APOC1-206ENST00000590334 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 RHPN1Q8TCX5 695 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.9□□□□□ -0.02
APOC1-206ENST00000590334 ZNF804BA4D1E1 1349 aa14.9□□□□□ -0.02
APOC1-206ENST00000590334 UTRNP46939 3433 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 MED23Q9ULK4 1368 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 WTIPA6NIX2 430 aaPredicted RBP14.89□□□□□ -0.03
APOC1-206ENST00000590334 GRIN3BO60391 1043 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 PUM3Q15397 648 aaKnown RBP14.89□□□□□ -0.03
APOC1-206ENST00000590334 GPR162Q16538 588 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 AKAP2Q9Y2D5 859 aa14.89□□□□□ -0.03
APOC1-206ENST00000590334 UFL1O94874 794 aa14.88□□□□□ -0.03
APOC1-206ENST00000590334 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
APOC1-206ENST00000590334 LPIN2Q92539 896 aa14.88□□□□□ -0.03
APOC1-206ENST00000590334 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
APOC1-206ENST00000590334 TAOK3Q9H2K8 898 aa14.88□□□□□ -0.03
APOC1-206ENST00000590334 KDM2BQ8NHM5 1336 aa14.88□□□□□ -0.03
APOC1-206ENST00000590334 C6orf229H3BNL8 230 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 SNAP23O00161 211 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 ARHGAP27Q6ZUM4 889 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms