RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ATG9AQ7Z3C6 839 aa18.81■□□□□ 0.6
ATG4D-211ENST00000589753 RIPOR2Q9Y4F9 1068 aa18.81■□□□□ 0.6
ATG4D-211ENST00000589753 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
ATG4D-211ENST00000589753 SLX4Q8IY92 1834 aa18.8■□□□□ 0.6
ATG4D-211ENST00000589753 SP8Q8IXZ3 490 aa18.8■□□□□ 0.6
ATG4D-211ENST00000589753 ATP6V0A2Q9Y487 856 aa18.8■□□□□ 0.6
ATG4D-211ENST00000589753 MROH5Q6ZUA9 1318 aa18.79■□□□□ 0.6
ATG4D-211ENST00000589753 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
ATG4D-211ENST00000589753 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
ATG4D-211ENST00000589753 MINPP1Q9UNW1 487 aa18.79■□□□□ 0.6
ATG4D-211ENST00000589753 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
ATG4D-211ENST00000589753 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
ATG4D-211ENST00000589753 CHRNDQ07001 517 aa18.78■□□□□ 0.6
ATG4D-211ENST00000589753 METTL24Q5JXM2 366 aa18.78■□□□□ 0.6
ATG4D-211ENST00000589753 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
ATG4D-211ENST00000589753 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
ATG4D-211ENST00000589753 WWC3Q9ULE0 1092 aa18.78■□□□□ 0.6
ATG4D-211ENST00000589753 LRRC37AA6NMS7 1700 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 APBB1O00213 710 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 SASH1O94885 1247 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 SMC5Q8IY18 1101 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 C7orf43Q8WVR3 580 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 BCS1LQ9Y276 419 aa18.77■□□□□ 0.6
ATG4D-211ENST00000589753 C21orf2O43822 256 aa18.76■□□□□ 0.59
ATG4D-211ENST00000589753 TFCP2Q12800 502 aa18.76■□□□□ 0.59
ATG4D-211ENST00000589753 CC2D2BQ6DHV5 1058 aa18.76■□□□□ 0.59
ATG4D-211ENST00000589753 HELBQ8NG08 1087 aaPredicted RBP18.76■□□□□ 0.59
ATG4D-211ENST00000589753 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
ATG4D-211ENST00000589753 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
ATG4D-211ENST00000589753 TAF5LO75529 589 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 GPSM2P81274 684 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 SOGA3Q5TF21 947 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 RHPN1Q8TCX5 695 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 LRRCC1Q9C099 1032 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 ANKIB1Q9P2G1 1089 aa18.75■□□□□ 0.59
ATG4D-211ENST00000589753 XDHP47989 1333 aa18.74■□□□□ 0.59
ATG4D-211ENST00000589753 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
ATG4D-211ENST00000589753 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
ATG4D-211ENST00000589753 PDE8BO95263 885 aa18.74■□□□□ 0.59
ATG4D-211ENST00000589753 CENPQQ7L2Z9 268 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-211ENST00000589753 VGLL2Q8N8G2 317 aa18.74■□□□□ 0.59
ATG4D-211ENST00000589753 NSFL1CQ9UNZ2 370 aaKnown RBP18.74■□□□□ 0.59
ATG4D-211ENST00000589753 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
ATG4D-211ENST00000589753 CCDC93Q567U6 631 aa18.73■□□□□ 0.59
ATG4D-211ENST00000589753 MPNDQ8N594 471 aa18.73■□□□□ 0.59
ATG4D-211ENST00000589753 PODXL2Q9NZ53 605 aa18.73■□□□□ 0.59
ATG4D-211ENST00000589753 ANKRD45Q5TZF3 282 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 DPP8Q6V1X1 898 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-211ENST00000589753 RTKN2Q8IZC4 609 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-211ENST00000589753 AKAP2Q9Y2D5 859 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 LEMD3Q9Y2U8 911 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-211ENST00000589753 SRCAPQ6ZRS2 3230 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 ARFGEF1Q9Y6D6 1849 aa18.72■□□□□ 0.59
ATG4D-211ENST00000589753 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-211ENST00000589753 ATP2B4P23634 1241 aa18.71■□□□□ 0.59
ATG4D-211ENST00000589753 KCNJ4P48050 445 aa18.71■□□□□ 0.59
ATG4D-211ENST00000589753 PUM3Q15397 648 aaKnown RBP18.71■□□□□ 0.59
ATG4D-211ENST00000589753 GPR108Q9NPR9 543 aa18.71■□□□□ 0.59
ATG4D-211ENST00000589753 GGA1Q9UJY5 639 aa18.71■□□□□ 0.59
ATG4D-211ENST00000589753 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
ATG4D-211ENST00000589753 UFL1O94874 794 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 UBE4AQ14139 1066 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
ATG4D-211ENST00000589753 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
ATG4D-211ENST00000589753 TBC1D16Q8TBP0 767 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 ZNF804BA4D1E1 1349 aa18.7■□□□□ 0.58
ATG4D-211ENST00000589753 ZNF609O15014 1411 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 SNAP23O00161 211 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 FGFR2P21802 821 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 NUCB1Q02818 461 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 LPIN2Q92539 896 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 POLLQ9UGP5 575 aa18.69■□□□□ 0.58
ATG4D-211ENST00000589753 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 A0A1B0GUL7 405 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 WTIPA6NIX2 430 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-211ENST00000589753 IFIT1P09914 478 aaKnown RBP18.68■□□□□ 0.58
ATG4D-211ENST00000589753 SLC5A1P13866 664 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 AACSQ86V21 672 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 EAF2Q96CJ1 260 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-211ENST00000589753 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 PSMD1Q99460 953 aa18.68■□□□□ 0.58
ATG4D-211ENST00000589753 RTFDC1Q9BY42 306 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-211ENST00000589753 YBX3P16989 372 aaKnown RBP eCLIP18.67■□□□□ 0.589e-6■□□□□ 10.4
ATG4D-211ENST00000589753 TIMM10P62072 90 aa18.67■□□□□ 0.58
ATG4D-211ENST00000589753 EYA3Q99504 573 aa18.67■□□□□ 0.58
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