RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 GNAI2P04899 355 aa26.51■■□□□ 1.83
R3HDM4-204ENST00000589428 MPHOSPH8Q99549 860 aa26.51■■□□□ 1.83
R3HDM4-204ENST00000589428 LMNB1P20700 586 aa26.49■■□□□ 1.83
R3HDM4-204ENST00000589428 DPP8Q6V1X1 898 aaPredicted RBP26.49■■□□□ 1.83
R3HDM4-204ENST00000589428 PSMD1Q99460 953 aa26.49■■□□□ 1.83
R3HDM4-204ENST00000589428 BSDC1Q9NW68 430 aaPredicted RBP26.49■■□□□ 1.83
R3HDM4-204ENST00000589428 MPNDQ8N594 471 aa26.48■■□□□ 1.83
R3HDM4-204ENST00000589428 RNF181Q9P0P0 153 aa26.47■■□□□ 1.83
R3HDM4-204ENST00000589428 NSFL1CQ9UNZ2 370 aaKnown RBP26.47■■□□□ 1.83
R3HDM4-204ENST00000589428 C9orf131Q5VYM1 1079 aa26.46■■□□□ 1.83
R3HDM4-204ENST00000589428 CEP85Q6P2H3 762 aa26.46■■□□□ 1.83
R3HDM4-204ENST00000589428 SIRT2Q8IXJ6 389 aa26.45■■□□□ 1.83
R3HDM4-204ENST00000589428 SUPT20HQ8NEM7 779 aa26.45■■□□□ 1.83
R3HDM4-204ENST00000589428 ANKIB1Q9P2G1 1089 aa26.45■■□□□ 1.83
R3HDM4-204ENST00000589428 SBF1O95248 1867 aa26.45■■□□□ 1.83
R3HDM4-204ENST00000589428 IGHDP01880 384 aa26.45■■□□□ 1.82
R3HDM4-204ENST00000589428 ZNF594Q96JF6 807 aaPredicted RBP26.45■■□□□ 1.82
R3HDM4-204ENST00000589428 ZNF277Q9NRM2 450 aaPredicted RBP26.45■■□□□ 1.82
R3HDM4-204ENST00000589428 GPSM2P81274 684 aa26.44■■□□□ 1.82
R3HDM4-204ENST00000589428 KDM2BQ8NHM5 1336 aa26.44■■□□□ 1.82
R3HDM4-204ENST00000589428 HDAC1Q13547 482 aaPredicted RBP26.43■■□□□ 1.82
R3HDM4-204ENST00000589428 LDHAL6AQ6ZMR3 332 aa26.43■■□□□ 1.82
R3HDM4-204ENST00000589428 CNNM1Q9NRU3 951 aa26.43■■□□□ 1.82
R3HDM4-204ENST00000589428 XDHP47989 1333 aa26.43■■□□□ 1.82
R3HDM4-204ENST00000589428 IARSP41252 1262 aaKnown RBP26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 PRELPP51888 382 aa26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 RPAP2Q8IXW5 612 aaPredicted RBP26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 RTFDC1Q9BY42 306 aaPredicted RBP26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 MINPP1Q9UNW1 487 aa26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 DUOX1Q9NRD9 1551 aa26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 CCDC88AQ3V6T2 1871 aa26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 PODXL2Q9NZ53 605 aa26.42■■□□□ 1.82
R3HDM4-204ENST00000589428 LTBP1Q14766 1721 aa26.41■■□□□ 1.82
R3HDM4-204ENST00000589428 GGA1Q9UJY5 639 aa26.41■■□□□ 1.82
R3HDM4-204ENST00000589428 TIAM2Q8IVF5 1701 aa26.4■■□□□ 1.82
R3HDM4-204ENST00000589428 C6orf229H3BNL8 230 aa26.4■■□□□ 1.82
R3HDM4-204ENST00000589428 YY1P25490 414 aa26.4■■□□□ 1.82
R3HDM4-204ENST00000589428 ANKRD2Q9GZV1 360 aa26.4■■□□□ 1.82
R3HDM4-204ENST00000589428 RWDD1Q9H446 243 aaPredicted RBP26.4■■□□□ 1.82
R3HDM4-204ENST00000589428 UFL1O94874 794 aa26.39■■□□□ 1.82
R3HDM4-204ENST00000589428 MTX1Q13505 466 aa26.39■■□□□ 1.82
R3HDM4-204ENST00000589428 SRGAP3O43295 1099 aa26.39■■□□□ 1.81
R3HDM4-204ENST00000589428 PPIP5K2O43314 1243 aa26.39■■□□□ 1.81
R3HDM4-204ENST00000589428 CHRNDQ07001 517 aa26.39■■□□□ 1.81
R3HDM4-204ENST00000589428 DICER1Q9UPY3 1922 aaKnown RBP26.39■■□□□ 1.81
R3HDM4-204ENST00000589428 ZC3H4Q9UPT8 1303 aaKnown RBP26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 CENPQQ7L2Z9 268 aaPredicted RBP26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 LARGE2Q8N3Y3 721 aa26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 KLHDC4Q8TBB5 520 aa26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 TBC1D16Q8TBP0 767 aa26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 EYA3Q99504 573 aa26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 VPS33BQ9H267 617 aa26.38■■□□□ 1.81
R3HDM4-204ENST00000589428 PNMA6EA0A0J9YXQ4 647 aa26.37■■□□□ 1.81
R3HDM4-204ENST00000589428 ATP2B4P23634 1241 aa26.37■■□□□ 1.81
R3HDM4-204ENST00000589428 RFX5P48382 616 aaPredicted RBP26.37■■□□□ 1.81
R3HDM4-204ENST00000589428 ATP8B2P98198 1209 aa26.37■■□□□ 1.81
R3HDM4-204ENST00000589428 POLLQ9UGP5 575 aa26.37■■□□□ 1.81
R3HDM4-204ENST00000589428 AOC3Q16853 763 aa26.36■■□□□ 1.81
R3HDM4-204ENST00000589428 JDP2Q8WYK2 163 aa26.36■■□□□ 1.81
R3HDM4-204ENST00000589428 PTPN12Q05209 780 aaKnown RBP26.36■■□□□ 1.81
R3HDM4-204ENST00000589428 PUS3Q9BZE2 481 aaKnown RBP26.36■■□□□ 1.81
R3HDM4-204ENST00000589428 KCNJ4P48050 445 aa26.35■■□□□ 1.81
R3HDM4-204ENST00000589428 KIAA2012Q0VF49 1180 aa26.35■■□□□ 1.81
R3HDM4-204ENST00000589428 WASHC4Q2M389 1173 aa26.35■■□□□ 1.81
R3HDM4-204ENST00000589428 A0A1B0GUL6 1792 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 MROH5Q6ZUA9 1318 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 LEMD3Q9Y2U8 911 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 HMMRO75330 724 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 LRRC24Q50LG9 513 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 NIM1KQ8IY84 436 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 FBXO3Q9UK99 471 aa26.34■■□□□ 1.81
R3HDM4-204ENST00000589428 EYA2O00167 538 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 POLA2Q14181 598 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 HELBQ8NG08 1087 aaPredicted RBP26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 SSH3Q8TE77 659 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 GPR101Q96P66 508 aaPredicted RBP26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 ZC3H12CQ9C0D7 883 aaKnown RBP26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 SIL1Q9H173 461 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 COPRSQ9NQ92 184 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 RIPOR2Q9Y4F9 1068 aa26.33■■□□□ 1.81
R3HDM4-204ENST00000589428 RIMBP2O15034 1052 aa26.32■■□□□ 1.8
R3HDM4-204ENST00000589428 TAF5LO75529 589 aa26.32■■□□□ 1.8
R3HDM4-204ENST00000589428 METTL24Q5JXM2 366 aa26.32■■□□□ 1.8
R3HDM4-204ENST00000589428 PA2G4Q9UQ80 394 aaKnown RBP26.32■■□□□ 1.8
R3HDM4-204ENST00000589428 ZNF804BA4D1E1 1349 aa26.32■■□□□ 1.8
R3HDM4-204ENST00000589428 COL4A5P29400 1685 aa26.31■■□□□ 1.8
R3HDM4-204ENST00000589428 SMC5Q8IY18 1101 aa26.31■■□□□ 1.8
R3HDM4-204ENST00000589428 MED23Q9ULK4 1368 aa26.3■■□□□ 1.8
R3HDM4-204ENST00000589428 CIAO1O76071 339 aa26.3■■□□□ 1.8
R3HDM4-204ENST00000589428 G3V3G9 751 aa26.28■■□□□ 1.8
R3HDM4-204ENST00000589428 DCAF8Q5TAQ9 597 aa26.28■■□□□ 1.8
R3HDM4-204ENST00000589428 DCTPP1Q9H773 170 aa26.28■■□□□ 1.8
R3HDM4-204ENST00000589428 IL15P40933 162 aaPredicted RBP26.28■■□□□ 1.8
R3HDM4-204ENST00000589428 WTIPA6NIX2 430 aaPredicted RBP26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 FZD9O00144 591 aa26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 EIF6P56537 245 aaKnown RBP26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 DPY19L2Q6NUT2 758 aa26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 ATG9AQ7Z3C6 839 aa26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 GCC1Q96CN9 775 aa26.27■■□□□ 1.8
R3HDM4-204ENST00000589428 ZNRF3Q9ULT6 936 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms