RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 ZNF521Q96K83 1311 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 E9PSI1 815 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 MAP2K2P36507 400 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 CTSWP56202 376 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 G2E3Q7L622 706 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 EYA3Q99504 573 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 GJA3Q9Y6H8 435 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 TLL2Q9Y6L7 1015 aa13.49□□□□□ -0.25
CLPTM1-211ENST00000589347 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 RPS8P62241 208 aaKnown RBP13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 KIAA2012Q0VF49 1180 aa13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 CST9Q5W186 159 aa13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 ZNRF3Q9ULT6 936 aa13.48□□□□□ -0.25
CLPTM1-211ENST00000589347 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 SCN9AQ15858 1988 aa13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
CLPTM1-211ENST00000589347 C6orf229H3BNL8 230 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 TNIP1Q15025 636 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 CIAPIN1Q6FI81 312 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 CCDC85AQ96PX6 553 aaPredicted RBP13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 ANKIB1Q9P2G1 1089 aa13.46□□□□□ -0.25
CLPTM1-211ENST00000589347 G3V3G9 751 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 AOC2O75106 756 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 SCNN1DP51172 638 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 GPSM2P81274 684 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 GCKRQ14397 625 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 HHIPL1Q96JK4 782 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
CLPTM1-211ENST00000589347 XDHP47989 1333 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 H7C1W4 665 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 UFL1O94874 794 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 DGKZQ13574 1117 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 BCL2L13Q9BXK5 485 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
CLPTM1-211ENST00000589347 TRAF5O00463 557 aa13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 GRM1Q13255 1194 aa13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 MYH13Q9UKX3 1938 aa13.43□□□□□ -0.26
CLPTM1-211ENST00000589347 ZNF646O15015 1829 aaPredicted RBP13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 ECE2O60344 883 aa13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 USP50Q70EL3 339 aaPredicted RBP13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 GREM2Q9H772 168 aa13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
CLPTM1-211ENST00000589347 PTPRCP08575 1304 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 F6X3S4 739 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 RAD17O75943 681 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 EPS15P42566 896 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 CXCL9Q07325 125 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 SLFN5Q08AF3 891 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 BEND3Q5T5X7 828 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 DBNDD1Q9H9R9 158 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 C9orf78Q9NZ63 289 aaPredicted RBP13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 GPRC5DQ9NZD1 345 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 ECM29Q5VYK3 1845 aa13.41□□□□□ -0.26
CLPTM1-211ENST00000589347 ARAP2Q8WZ64 1704 aa13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 GRM8O00222 908 aa13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 CT47B1P0C2W7 299 aaPredicted RBP13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 ITGA6P23229 1130 aa13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 GMPSP49915 693 aaPredicted RBP13.4□□□□□ -0.26
CLPTM1-211ENST00000589347 RPS12P25398 132 aaKnown RBP13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 CASP7P55210 303 aa13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 ANKRD2Q9GZV1 360 aa13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 ZNF609O15014 1411 aa13.39□□□□□ -0.27
CLPTM1-211ENST00000589347 MKI67P46013 3256 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms