RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 GGA3Q9NZ52 723 aa19.78■□□□□ 0.76
SF3A2-204ENST00000589118 TMPOP42166 694 aaKnown RBP19.77■□□□□ 0.76
SF3A2-204ENST00000589118 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
SF3A2-204ENST00000589118 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.76
SF3A2-204ENST00000589118 CCDC102AQ96A19 550 aa19.77■□□□□ 0.76
SF3A2-204ENST00000589118 CDCA5Q96FF9 252 aa19.77■□□□□ 0.76
SF3A2-204ENST00000589118 ISCA1Q9BUE6 129 aa19.77■□□□□ 0.76
SF3A2-204ENST00000589118 SEC31BQ9NQW1 1179 aa19.77■□□□□ 0.76
SF3A2-204ENST00000589118 SLC10A3P09131 477 aa19.76■□□□□ 0.75
SF3A2-204ENST00000589118 SF3B3Q15393 1217 aaKnown RBP19.76■□□□□ 0.75
SF3A2-204ENST00000589118 ANKRD13DQ6ZTN6 518 aa19.75■□□□□ 0.75
SF3A2-204ENST00000589118 TMC4Q7Z404 712 aa19.75■□□□□ 0.75
SF3A2-204ENST00000589118 PLBD2Q8NHP8 589 aa19.75■□□□□ 0.75
SF3A2-204ENST00000589118 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
SF3A2-204ENST00000589118 SAGE1Q9NXZ1 904 aa19.75■□□□□ 0.75
SF3A2-204ENST00000589118 WTIPA6NIX2 430 aaPredicted RBP19.74■□□□□ 0.75
SF3A2-204ENST00000589118 SCARF1Q14162 830 aa19.74■□□□□ 0.75
SF3A2-204ENST00000589118 ANGEL2Q5VTE6 544 aaKnown RBP19.74■□□□□ 0.75
SF3A2-204ENST00000589118 PRAMEF18Q5VWM3 479 aa19.74■□□□□ 0.75
SF3A2-204ENST00000589118 SULF1Q8IWU6 871 aa19.74■□□□□ 0.75
SF3A2-204ENST00000589118 CCDC85AQ96PX6 553 aaPredicted RBP19.74■□□□□ 0.75
SF3A2-204ENST00000589118 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
SF3A2-204ENST00000589118 VIL1P09327 827 aaKnown RBP19.73■□□□□ 0.75
SF3A2-204ENST00000589118 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
SF3A2-204ENST00000589118 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
SF3A2-204ENST00000589118 RASAL3Q86YV0 1011 aa19.73■□□□□ 0.75
SF3A2-204ENST00000589118 CHL1O00533 1208 aa19.72■□□□□ 0.75
SF3A2-204ENST00000589118 TBC1D8O95759 1140 aa19.72■□□□□ 0.75
SF3A2-204ENST00000589118 HDGFL1Q5TGJ6 251 aa19.72■□□□□ 0.75
SF3A2-204ENST00000589118 EYA3Q99504 573 aa19.72■□□□□ 0.75
SF3A2-204ENST00000589118 ZC3H12CQ9C0D7 883 aaKnown RBP19.72■□□□□ 0.75
SF3A2-204ENST00000589118 PCDH10Q9P2E7 1040 aa19.72■□□□□ 0.75
SF3A2-204ENST00000589118 G3V3G9 751 aa19.71■□□□□ 0.75
SF3A2-204ENST00000589118 UBE2Q2LH0YL09 131 aa19.71■□□□□ 0.75
SF3A2-204ENST00000589118 UFL1O94874 794 aa19.71■□□□□ 0.75
SF3A2-204ENST00000589118 DCAF8Q5TAQ9 597 aa19.71■□□□□ 0.75
SF3A2-204ENST00000589118 CTU1Q7Z7A3 348 aaKnown RBP19.71■□□□□ 0.75
SF3A2-204ENST00000589118 BABAM1Q9NWV8 329 aa19.71■□□□□ 0.75
SF3A2-204ENST00000589118 MXD3Q9BW11 206 aa19.7■□□□□ 0.74
SF3A2-204ENST00000589118 ANKIB1Q9P2G1 1089 aa19.7■□□□□ 0.74
SF3A2-204ENST00000589118 TRIM35Q9UPQ4 493 aa19.7■□□□□ 0.74
SF3A2-204ENST00000589118 HPS5Q9UPZ3 1129 aa19.7■□□□□ 0.74
SF3A2-204ENST00000589118 MKRN3Q13064 507 aaKnown RBP19.69■□□□□ 0.74
SF3A2-204ENST00000589118 PHAXQ9H814 394 aaKnown RBP19.69■□□□□ 0.74
SF3A2-204ENST00000589118 PSME4Q14997 1843 aa19.69■□□□□ 0.74
SF3A2-204ENST00000589118 ZNF280AP59817 542 aaPredicted RBP19.68■□□□□ 0.74
SF3A2-204ENST00000589118 RSBN1LQ6PCB5 846 aaPredicted RBP19.68■□□□□ 0.74
SF3A2-204ENST00000589118 ZNF296Q8WUU4 475 aaPredicted RBP19.67■□□□□ 0.74
SF3A2-204ENST00000589118 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 GMLQ99445 158 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 MYD88Q99836 296 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 MYOZ2Q9NPC6 264 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 PODXL2Q9NZ53 605 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 DBF4Q9UBU7 674 aaPredicted RBP19.66■□□□□ 0.74
SF3A2-204ENST00000589118 GGA1Q9UJY5 639 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 SPEF2Q9C093 1822 aa19.66■□□□□ 0.74
SF3A2-204ENST00000589118 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
SF3A2-204ENST00000589118 RIC3Q7Z5B4 369 aa19.65■□□□□ 0.74
SF3A2-204ENST00000589118 R3HDMLQ9H3Y0 253 aa19.65■□□□□ 0.74
SF3A2-204ENST00000589118 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
SF3A2-204ENST00000589118 PAPPA2Q9BXP8 1791 aa19.65■□□□□ 0.74
SF3A2-204ENST00000589118 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
SF3A2-204ENST00000589118 PRKG1Q13976 671 aa19.64■□□□□ 0.73
SF3A2-204ENST00000589118 AGBL3Q8NEM8 1001 aa19.64■□□□□ 0.73
SF3A2-204ENST00000589118 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.64■□□□□ 0.73
SF3A2-204ENST00000589118 TRIM28Q13263 835 aaKnown RBP19.63■□□□□ 0.73
SF3A2-204ENST00000589118 PRPF38BQ5VTL8 546 aaKnown RBP19.63■□□□□ 0.73
SF3A2-204ENST00000589118 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
SF3A2-204ENST00000589118 HYPKQ9NX55 129 aa19.63■□□□□ 0.73
SF3A2-204ENST00000589118 FZD1Q9UP38 647 aa19.63■□□□□ 0.73
SF3A2-204ENST00000589118 ZNF646O15015 1829 aaPredicted RBP19.62■□□□□ 0.73
SF3A2-204ENST00000589118 TTLL12Q14166 644 aaPredicted RBP19.62■□□□□ 0.73
SF3A2-204ENST00000589118 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
SF3A2-204ENST00000589118 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
SF3A2-204ENST00000589118 USP17L3A6NCW0 530 aa19.6■□□□□ 0.73
SF3A2-204ENST00000589118 USP17L4A6NCW7 530 aa19.6■□□□□ 0.73
SF3A2-204ENST00000589118 USP17L1Q7RTZ2 530 aa19.6■□□□□ 0.73
SF3A2-204ENST00000589118 GPR25O00155 361 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 PDE8AO60658 829 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 SASH1O94885 1247 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 FKBP1BP68106 108 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 CCDC152Q4G0S7 254 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
SF3A2-204ENST00000589118 XDHP47989 1333 aa19.58■□□□□ 0.73
SF3A2-204ENST00000589118 PCCAP05165 728 aaPredicted RBP19.58■□□□□ 0.72
SF3A2-204ENST00000589118 PTPN12Q05209 780 aaKnown RBP19.58■□□□□ 0.72
SF3A2-204ENST00000589118 GOLGA2Q08379 1002 aa19.58■□□□□ 0.72
SF3A2-204ENST00000589118 TXNRD3Q86VQ6 643 aa19.58■□□□□ 0.72
SF3A2-204ENST00000589118 ANKRD18AQ8IVF6 992 aa19.58■□□□□ 0.72
SF3A2-204ENST00000589118 REM2Q8IYK8 340 aaPredicted RBP19.58■□□□□ 0.72
SF3A2-204ENST00000589118 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
SF3A2-204ENST00000589118 HOXB7P09629 217 aa19.57■□□□□ 0.72
SF3A2-204ENST00000589118 TM4SF4P48230 202 aa19.57■□□□□ 0.72
SF3A2-204ENST00000589118 ADAMTS8Q9UP79 889 aa19.57■□□□□ 0.72
SF3A2-204ENST00000589118 WNT10BO00744 389 aa19.56■□□□□ 0.72
SF3A2-204ENST00000589118 ATP2B4P23634 1241 aa19.56■□□□□ 0.72
SF3A2-204ENST00000589118 DACT2Q5SW24 774 aa19.56■□□□□ 0.72
SF3A2-204ENST00000589118 CWC25Q9NXE8 425 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms