RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NEURL1BA8MQ27 555 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 GCKRQ14397 625 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 ANKRD1Q15327 319 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 VPS53Q5VIR6 699 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 ASTLQ6HA08 431 aaPredicted RBP8.86□□□□□ -0.99
ZNF540-206ENST00000589117 XAGE3Q8WTP9 111 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 SUCLG2Q96I99 432 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
ZNF540-206ENST00000589117 SMC3Q9UQE7 1217 aa8.86□□□□□ -0.99
ZNF540-206ENST00000589117 TUBGCP6Q96RT7 1819 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 TRPM3Q9HCF6 1732 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-206ENST00000589117 ESPNB1AK53 854 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 PLCG2P16885 1265 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 CASTP20810 708 aaKnown RBP8.85□□□□□ -0.99
ZNF540-206ENST00000589117 SLC39A6Q13433 755 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 PA2G4Q9UQ80 394 aaKnown RBP8.85□□□□□ -0.99
ZNF540-206ENST00000589117 ABCC6O95255 1503 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 TMEM94Q12767 1356 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 PRAMEF22A3QJZ6 481 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 LETM1O95202 739 aaPredicted RBP8.85□□□□□ -0.99
ZNF540-206ENST00000589117 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 MYD88Q99836 296 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 PDRG1Q9NUG6 133 aa8.85□□□□□ -0.99
ZNF540-206ENST00000589117 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 AK9Q5TCS8 1911 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 AK2P54819 239 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 LRSAM1Q6UWE0 723 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
ZNF540-206ENST00000589117 TTC14Q96N46 770 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 PPP1R9BQ96SB3 815 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 EPAS1Q99814 870 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 FSD1Q9BTV5 496 aa8.84□□□□□ -0.99
ZNF540-206ENST00000589117 SASH1O94885 1247 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 HS1BP3Q53T59 392 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
ZNF540-206ENST00000589117 RUFY3Q7L099 469 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 TICAM2Q86XR7 235 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 KCNB2Q92953 911 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 EAF2Q96CJ1 260 aaPredicted RBP8.83□□□□□ -1
ZNF540-206ENST00000589117 JAKMIP1Q96N16 626 aaKnown RBP8.83□□□□□ -1
ZNF540-206ENST00000589117 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 COPRSQ9NQ92 184 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 HMG20BQ9P0W2 317 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 CCDC171Q6TFL3 1326 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 ADAMTS7Q9UKP4 1686 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 STX6O43752 255 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 ZSCAN22P10073 491 aaPredicted RBP8.83□□□□□ -1
ZNF540-206ENST00000589117 PDCP20941 246 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 KRT32Q14532 448 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 PLBD2Q8NHP8 589 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 GPT2Q8TD30 523 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 MAP4K1Q92918 833 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 CCDC8Q9H0W5 538 aaPredicted RBP8.83□□□□□ -1
ZNF540-206ENST00000589117 SIL1Q9H173 461 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 IL25Q9H293 177 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 CPDO75976 1380 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 COL15A1P39059 1388 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 TNS3Q68CZ2 1445 aa8.83□□□□□ -1
ZNF540-206ENST00000589117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 NECTIN1Q15223 517 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 IER5LQ5T953 404 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 KAZALD1Q96I82 304 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 RRAGDQ9NQL2 400 aaPredicted RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 SPATA31A3Q5VYP0 1347 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 ALS2Q96Q42 1657 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 SIPA1L3O60292 1781 aaPredicted RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 A0A087WZG4 1122 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 ATP5JP18859 108 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 MSNP26038 577 aaKnown RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 BOLA2Q9H3K6 86 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 RBM8AQ9Y5S9 174 aaKnown RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 USP16Q9Y5T5 823 aa8.82□□□□□ -1
ZNF540-206ENST00000589117 KDM6AO15550 1401 aaPredicted RBP8.82□□□□□ -1
ZNF540-206ENST00000589117 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 CYP27B1O15528 508 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 OATP04181 439 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 RFX1P22670 979 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 PTH1RQ03431 593 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 CREB3L3Q68CJ9 461 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 UBE3BQ7Z3V4 1068 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 FAM184AQ8NB25 1140 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 PCDH11XQ9BZA7 1347 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 PCDH11YQ9BZA8 1340 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 SYCE3A1L190 88 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 POTEFA5A3E0 1075 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 SYT1P21579 422 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 UBE2HP62256 183 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 NMIQ13287 307 aaPredicted RBP8.81□□□□□ -1
ZNF540-206ENST00000589117 CHRNA2Q15822 529 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 RABL6Q3YEC7 729 aaPredicted RBP8.81□□□□□ -1
ZNF540-206ENST00000589117 TMEM87AQ8NBN3 555 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
ZNF540-206ENST00000589117 ALDH8A1Q9H2A2 487 aaPredicted RBP8.81□□□□□ -1
ZNF540-206ENST00000589117 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
ZNF540-206ENST00000589117 SCN11AQ9UI33 1791 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms