RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 BEND3Q5T5X7 828 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 C3orf67Q6ZVT6 689 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 UBE3BQ7Z3V4 1068 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 TMC4Q7Z404 712 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
APOC1-204ENST00000589078 SRCIN1Q9C0H9 1055 aa12.23□□□□□ -0.45
APOC1-204ENST00000589078 CASP8AP2Q9UKL3 1982 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 H7C1W4 665 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
APOC1-204ENST00000589078 SCNN1DP51172 638 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 GRAPQ13588 217 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 CST9Q5W186 159 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
APOC1-204ENST00000589078 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 MCOLN1Q9GZU1 580 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
APOC1-204ENST00000589078 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
APOC1-204ENST00000589078 PDE4DIPQ5VU43 2346 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 ABCC4O15439 1325 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 EPS15P42566 896 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 CTSWP56202 376 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
APOC1-204ENST00000589078 PSMD1Q99460 953 aa12.21□□□□□ -0.45
APOC1-204ENST00000589078 NOB1Q9ULX3 412 aaKnown RBP12.21□□□□□ -0.45
APOC1-204ENST00000589078 GRM8O00222 908 aa12.2□□□□□ -0.46
APOC1-204ENST00000589078 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
APOC1-204ENST00000589078 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
APOC1-204ENST00000589078 JARID2Q92833 1246 aaPredicted RBP12.2□□□□□ -0.46
APOC1-204ENST00000589078 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
APOC1-204ENST00000589078 MAP2K2P36507 400 aa12.19□□□□□ -0.46
APOC1-204ENST00000589078 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
APOC1-204ENST00000589078 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
APOC1-204ENST00000589078 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
APOC1-204ENST00000589078 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
APOC1-204ENST00000589078 CA12O43570 354 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 RPS8P62241 208 aaKnown RBP12.18□□□□□ -0.46
APOC1-204ENST00000589078 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 SP8Q8IXZ3 490 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
APOC1-204ENST00000589078 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
APOC1-204ENST00000589078 CASP7P55210 303 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 DGKZQ13574 1117 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
APOC1-204ENST00000589078 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 ANKRD18AQ8IVF6 992 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
APOC1-204ENST00000589078 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
APOC1-204ENST00000589078 BCAR3O75815 825 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
APOC1-204ENST00000589078 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
APOC1-204ENST00000589078 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 MPNDQ8N594 471 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
APOC1-204ENST00000589078 GREM2Q9H772 168 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
APOC1-204ENST00000589078 IFIT5Q13325 482 aaKnown RBP12.15□□□□□ -0.46
APOC1-204ENST00000589078 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
APOC1-204ENST00000589078 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
APOC1-204ENST00000589078 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
APOC1-204ENST00000589078 NIM1KQ8IY84 436 aa12.15□□□□□ -0.46
APOC1-204ENST00000589078 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
APOC1-204ENST00000589078 VPS33BQ9H267 617 aa12.15□□□□□ -0.46
APOC1-204ENST00000589078 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
APOC1-204ENST00000589078 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
APOC1-204ENST00000589078 UTYO14607 1347 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 CSF1RP07333 972 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 ITGA6P23229 1130 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 CCDC57Q2TAC2 916 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
APOC1-204ENST00000589078 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 ZNF408Q9H9D4 720 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 GPRC5DQ9NZD1 345 aa12.14□□□□□ -0.47
APOC1-204ENST00000589078 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 UBTFL1P0CB47 393 aaPredicted RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 MS4A1P11836 297 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 TRIM27P14373 513 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 FOXO4P98177 505 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 AOC3Q16853 763 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 EYA3Q99504 573 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
APOC1-204ENST00000589078 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
APOC1-204ENST00000589078 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
APOC1-204ENST00000589078 GNAI3P08754 354 aa12.12□□□□□ -0.47
APOC1-204ENST00000589078 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
APOC1-204ENST00000589078 SOX10P56693 466 aa12.12□□□□□ -0.47
APOC1-204ENST00000589078 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
APOC1-204ENST00000589078 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
APOC1-204ENST00000589078 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms