RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
VMP1-209ENST00000588915 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
VMP1-209ENST00000588915 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
VMP1-209ENST00000588915 DCPSQ96C86 337 aaKnown RBP18.1■□□□□ 0.49
VMP1-209ENST00000588915 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
VMP1-209ENST00000588915 PDE8AO60658 829 aa18.09■□□□□ 0.49
VMP1-209ENST00000588915 HUNKP57058 714 aa18.09■□□□□ 0.49
VMP1-209ENST00000588915 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
VMP1-209ENST00000588915 C2orf69Q8N8R5 385 aa18.09■□□□□ 0.49
VMP1-209ENST00000588915 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
VMP1-209ENST00000588915 RTL9Q8NET4 1388 aa18.08■□□□□ 0.49
VMP1-209ENST00000588915 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
VMP1-209ENST00000588915 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
VMP1-209ENST00000588915 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
VMP1-209ENST00000588915 CCDC102AQ96A19 550 aa18.08■□□□□ 0.48
VMP1-209ENST00000588915 GBA2Q9HCG7 927 aaPredicted RBP18.08■□□□□ 0.48
VMP1-209ENST00000588915 KCNQ5Q9NR82 932 aa18.08■□□□□ 0.48
VMP1-209ENST00000588915 GGA1Q9UJY5 639 aa18.08■□□□□ 0.48
VMP1-209ENST00000588915 ZNF609O15014 1411 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 G3V3G9 751 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 APAF1O14727 1248 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 RGS19P49795 217 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 DCAF8Q5TAQ9 597 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 AGBL3Q8NEM8 1001 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 MYD88Q99836 296 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
VMP1-209ENST00000588915 SEC31BQ9NQW1 1179 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
VMP1-209ENST00000588915 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
VMP1-209ENST00000588915 KIF4BQ2VIQ3 1234 aa18.06■□□□□ 0.48
VMP1-209ENST00000588915 CCDC30Q5VVM6 783 aa18.06■□□□□ 0.48
VMP1-209ENST00000588915 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
VMP1-209ENST00000588915 TSKSQ9UJT2 592 aa18.06■□□□□ 0.48
VMP1-209ENST00000588915 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
VMP1-209ENST00000588915 UFL1O94874 794 aa18.05■□□□□ 0.48
VMP1-209ENST00000588915 EGFRP00533 1210 aa18.05■□□□□ 0.48
VMP1-209ENST00000588915 RBM26Q5T8P6 1007 aaKnown RBP18.05■□□□□ 0.48
VMP1-209ENST00000588915 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
VMP1-209ENST00000588915 SULF1Q8IWU6 871 aa18.05■□□□□ 0.48
VMP1-209ENST00000588915 XDHP47989 1333 aa18.04■□□□□ 0.48
VMP1-209ENST00000588915 COL4A1P02462 1669 aa18.04■□□□□ 0.48
VMP1-209ENST00000588915 ZNF280AP59817 542 aaPredicted RBP18.04■□□□□ 0.48
VMP1-209ENST00000588915 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
VMP1-209ENST00000588915 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
VMP1-209ENST00000588915 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
VMP1-209ENST00000588915 SAGE1Q9NXZ1 904 aa18.04■□□□□ 0.48
VMP1-209ENST00000588915 POLR2AP24928 1970 aaKnown RBP18.04■□□□□ 0.48
VMP1-209ENST00000588915 CCDC85CA6NKD9 419 aa18.03■□□□□ 0.48
VMP1-209ENST00000588915 FAM155AB1AL88 458 aaPredicted RBP18.03■□□□□ 0.48
VMP1-209ENST00000588915 ATP2B4P23634 1241 aa18.03■□□□□ 0.48
VMP1-209ENST00000588915 ADM5C9JUS6 153 aa18.02■□□□□ 0.48
VMP1-209ENST00000588915 DLK2Q6UY11 383 aa18.02■□□□□ 0.48
VMP1-209ENST00000588915 KSR2Q6VAB6 950 aa18.02■□□□□ 0.48
VMP1-209ENST00000588915 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.48
VMP1-209ENST00000588915 ZIC5Q96T25 663 aa18.02■□□□□ 0.48
VMP1-209ENST00000588915 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.48
VMP1-209ENST00000588915 MCOLN1Q9GZU1 580 aa18.02■□□□□ 0.48
VMP1-209ENST00000588915 SCN9AQ15858 1988 aa18.01■□□□□ 0.47
VMP1-209ENST00000588915 ZNF157P51786 506 aaPredicted RBP18.01■□□□□ 0.47
VMP1-209ENST00000588915 FKBP1BP68106 108 aa18.01■□□□□ 0.47
VMP1-209ENST00000588915 GMLQ99445 158 aa18.01■□□□□ 0.47
VMP1-209ENST00000588915 GGA3Q9NZ52 723 aa18.01■□□□□ 0.47
VMP1-209ENST00000588915 MAP3K2Q9Y2U5 619 aa18.01■□□□□ 0.47
VMP1-209ENST00000588915 PITPNM2Q9BZ72 1349 aa18■□□□□ 0.47
VMP1-209ENST00000588915 USP17L3A6NCW0 530 aa18■□□□□ 0.47
VMP1-209ENST00000588915 USP17L4A6NCW7 530 aa18■□□□□ 0.47
VMP1-209ENST00000588915 USP17L8P0C7I0 530 aa18■□□□□ 0.47
VMP1-209ENST00000588915 MMP14P50281 582 aa18■□□□□ 0.47
VMP1-209ENST00000588915 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
VMP1-209ENST00000588915 MLLT1Q03111 559 aaPredicted RBP18■□□□□ 0.47
VMP1-209ENST00000588915 SCARF1Q14162 830 aa18■□□□□ 0.47
VMP1-209ENST00000588915 FAM161AQ3B820 660 aa18■□□□□ 0.47
VMP1-209ENST00000588915 USP17L1Q7RTZ2 530 aa18■□□□□ 0.47
VMP1-209ENST00000588915 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
VMP1-209ENST00000588915 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
VMP1-209ENST00000588915 PI4KAP2A4QPH2 592 aa17.99■□□□□ 0.47
VMP1-209ENST00000588915 CTSWP56202 376 aa17.99■□□□□ 0.47
VMP1-209ENST00000588915 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
VMP1-209ENST00000588915 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
VMP1-209ENST00000588915 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
VMP1-209ENST00000588915 IGKV5-2P06315 115 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 SLC10A3P09131 477 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 DGKZQ13574 1117 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 ANGEL2Q5VTE6 544 aaKnown RBP17.98■□□□□ 0.47
VMP1-209ENST00000588915 CDCA5Q96FF9 252 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 CCDC85AQ96PX6 553 aaPredicted RBP17.98■□□□□ 0.47
VMP1-209ENST00000588915 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 MYOZ2Q9NPC6 264 aa17.98■□□□□ 0.47
VMP1-209ENST00000588915 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
VMP1-209ENST00000588915 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
VMP1-209ENST00000588915 JARID2Q92833 1246 aaPredicted RBP17.97■□□□□ 0.47
VMP1-209ENST00000588915 MINPP1Q9UNW1 487 aa17.97■□□□□ 0.47
VMP1-209ENST00000588915 PSME4Q14997 1843 aa17.97■□□□□ 0.47
VMP1-209ENST00000588915 TSPYL6Q8N831 410 aa17.96■□□□□ 0.47
VMP1-209ENST00000588915 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
VMP1-209ENST00000588915 RNF186Q9NXI6 227 aa17.96■□□□□ 0.47
VMP1-209ENST00000588915 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
VMP1-209ENST00000588915 ASTN2O75129 1339 aaPredicted RBP17.96■□□□□ 0.46
VMP1-209ENST00000588915 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms