RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 AOC3Q16853 763 aa25.36■■□□□ 1.65
DDX39A-207ENST00000588542 MPHOSPH8Q99549 860 aa25.36■■□□□ 1.65
DDX39A-207ENST00000588542 LRRFIP2Q9Y608 721 aaKnown RBP25.36■■□□□ 1.65
DDX39A-207ENST00000588542 TBC1D16Q8TBP0 767 aa25.35■■□□□ 1.65
DDX39A-207ENST00000588542 PANK1Q8TE04 598 aa25.35■■□□□ 1.65
DDX39A-207ENST00000588542 ANKIB1Q9P2G1 1089 aa25.35■■□□□ 1.65
DDX39A-207ENST00000588542 XDHP47989 1333 aa25.35■■□□□ 1.65
DDX39A-207ENST00000588542 PPIP5K2O43314 1243 aa25.34■■□□□ 1.65
DDX39A-207ENST00000588542 LARGE2Q8N3Y3 721 aa25.34■■□□□ 1.65
DDX39A-207ENST00000588542 WTIPA6NIX2 430 aaPredicted RBP25.33■■□□□ 1.65
DDX39A-207ENST00000588542 C6orf229H3BNL8 230 aa25.33■■□□□ 1.65
DDX39A-207ENST00000588542 KIAA2012Q0VF49 1180 aa25.33■■□□□ 1.65
DDX39A-207ENST00000588542 ZNF526Q8TF50 670 aaPredicted RBP25.33■■□□□ 1.65
DDX39A-207ENST00000588542 GPR101Q96P66 508 aaPredicted RBP25.33■■□□□ 1.65
DDX39A-207ENST00000588542 FZD9O00144 591 aa25.32■■□□□ 1.64
DDX39A-207ENST00000588542 ITPRIPQ8IWB1 547 aa25.32■■□□□ 1.64
DDX39A-207ENST00000588542 GGA1Q9UJY5 639 aa25.32■■□□□ 1.64
DDX39A-207ENST00000588542 HDAC5Q9UQL6 1122 aa25.32■■□□□ 1.64
DDX39A-207ENST00000588542 GLTPD2A6NH11 291 aa25.31■■□□□ 1.64
DDX39A-207ENST00000588542 UFL1O94874 794 aa25.31■■□□□ 1.64
DDX39A-207ENST00000588542 RFX5P48382 616 aaPredicted RBP25.31■■□□□ 1.64
DDX39A-207ENST00000588542 TAF7LQ5H9L4 462 aa25.31■■□□□ 1.64
DDX39A-207ENST00000588542 LDHAL6AQ6ZMR3 332 aa25.31■■□□□ 1.64
DDX39A-207ENST00000588542 JDP2Q8WYK2 163 aa25.31■■□□□ 1.64
DDX39A-207ENST00000588542 ZBTB7BO15156 539 aaPredicted RBP25.3■■□□□ 1.64
DDX39A-207ENST00000588542 MS4A1P11836 297 aa25.3■■□□□ 1.64
DDX39A-207ENST00000588542 ATP2B4P23634 1241 aa25.3■■□□□ 1.64
DDX39A-207ENST00000588542 CHRNDQ07001 517 aa25.3■■□□□ 1.64
DDX39A-207ENST00000588542 WASHC4Q2M389 1173 aa25.3■■□□□ 1.64
DDX39A-207ENST00000588542 PUS3Q9BZE2 481 aaKnown RBP25.3■■□□□ 1.64
DDX39A-207ENST00000588542 ZNF541Q9H0D2 1346 aa25.3■■□□□ 1.64
DDX39A-207ENST00000588542 WDR90Q96KV7 1748 aa25.29■■□□□ 1.64
DDX39A-207ENST00000588542 KLHDC4Q8TBB5 520 aa25.29■■□□□ 1.64
DDX39A-207ENST00000588542 EYA3Q99504 573 aa25.29■■□□□ 1.64
DDX39A-207ENST00000588542 ANKRD2Q9GZV1 360 aa25.29■■□□□ 1.64
DDX39A-207ENST00000588542 RIMBP2O15034 1052 aa25.28■■□□□ 1.64
DDX39A-207ENST00000588542 GNAI2P04899 355 aa25.28■■□□□ 1.64
DDX39A-207ENST00000588542 NIM1KQ8IY84 436 aa25.28■■□□□ 1.64
DDX39A-207ENST00000588542 GPBP1L1Q9HC44 474 aaPredicted RBP25.28■■□□□ 1.64
DDX39A-207ENST00000588542 CNNM1Q9NRU3 951 aa25.28■■□□□ 1.64
DDX39A-207ENST00000588542 RIPOR2Q9Y4F9 1068 aa25.28■■□□□ 1.64
DDX39A-207ENST00000588542 SCN9AQ15858 1988 aa25.27■■□□□ 1.64
DDX39A-207ENST00000588542 PTPN12Q05209 780 aaKnown RBP25.27■■□□□ 1.64
DDX39A-207ENST00000588542 C20orf194Q5TEA3 1177 aa25.27■■□□□ 1.64
DDX39A-207ENST00000588542 HELBQ8NG08 1087 aaPredicted RBP25.27■■□□□ 1.64
DDX39A-207ENST00000588542 LEMD3Q9Y2U8 911 aa25.27■■□□□ 1.64
DDX39A-207ENST00000588542 KDM2BQ8NHM5 1336 aa25.27■■□□□ 1.64
DDX39A-207ENST00000588542 PSME4Q14997 1843 aa25.26■■□□□ 1.63
DDX39A-207ENST00000588542 TAF5LO75529 589 aa25.26■■□□□ 1.63
DDX39A-207ENST00000588542 MTX1Q13505 466 aa25.26■■□□□ 1.63
DDX39A-207ENST00000588542 LRRC24Q50LG9 513 aa25.26■■□□□ 1.63
DDX39A-207ENST00000588542 DPY19L2Q6NUT2 758 aa25.26■■□□□ 1.63
DDX39A-207ENST00000588542 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
DDX39A-207ENST00000588542 DDNO94850 711 aaPredicted RBP25.25■■□□□ 1.63
DDX39A-207ENST00000588542 MVPQ14764 893 aaKnown RBP25.25■■□□□ 1.63
DDX39A-207ENST00000588542 ZC3H12CQ9C0D7 883 aaKnown RBP25.25■■□□□ 1.63
DDX39A-207ENST00000588542 NMRK2Q9NPI5 230 aa25.25■■□□□ 1.63
DDX39A-207ENST00000588542 ZNRF3Q9ULT6 936 aa25.25■■□□□ 1.63
DDX39A-207ENST00000588542 MED23Q9ULK4 1368 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 ZNF804BA4D1E1 1349 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 YDJCA8MPS7 323 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 SNAP23O00161 211 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 PDE3AQ14432 1141 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 COG6Q9Y2V7 657 aa25.24■■□□□ 1.63
DDX39A-207ENST00000588542 IRS2Q9Y4H2 1338 aa25.23■■□□□ 1.63
DDX39A-207ENST00000588542 EIF6P56537 245 aaKnown RBP25.23■■□□□ 1.63
DDX39A-207ENST00000588542 DOK7Q18PE1 504 aa25.23■■□□□ 1.63
DDX39A-207ENST00000588542 DBNDD1Q9H9R9 158 aa25.23■■□□□ 1.63
DDX39A-207ENST00000588542 ZNF646O15015 1829 aaPredicted RBP25.23■■□□□ 1.63
DDX39A-207ENST00000588542 SCN4AP35499 1836 aa25.23■■□□□ 1.63
DDX39A-207ENST00000588542 POTECB2RU33 542 aa25.22■■□□□ 1.63
DDX39A-207ENST00000588542 KLRK1P26718 216 aa25.22■■□□□ 1.63
DDX39A-207ENST00000588542 TXNRD3Q86VQ6 643 aa25.22■■□□□ 1.63
DDX39A-207ENST00000588542 C1orf115Q9H7X2 142 aa25.22■■□□□ 1.63
DDX39A-207ENST00000588542 RRAGCQ9HB90 399 aa25.22■■□□□ 1.63
DDX39A-207ENST00000588542 MROH5Q6ZUA9 1318 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 EYA2O00167 538 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 SRGAP3O43295 1099 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 ECE2O60344 883 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 CXCL9Q07325 125 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 ATG9AQ7Z3C6 839 aa25.21■■□□□ 1.63
DDX39A-207ENST00000588542 PA2G4Q9UQ80 394 aaKnown RBP25.21■■□□□ 1.63
DDX39A-207ENST00000588542 PNMA6EA0A0J9YXQ4 647 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 KIF3CO14782 793 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 GPC2Q8N158 579 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 VGLL2Q8N8G2 317 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 COPRSQ9NQ92 184 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 DDX19BQ9UMR2 479 aa25.2■■□□□ 1.62
DDX39A-207ENST00000588542 KCNJ4P48050 445 aa25.19■■□□□ 1.62
DDX39A-207ENST00000588542 RRP1P56182 461 aaKnown RBP25.19■■□□□ 1.62
DDX39A-207ENST00000588542 L3MBTL3Q96JM7 780 aaPredicted RBP25.19■■□□□ 1.62
DDX39A-207ENST00000588542 KCNQ5Q9NR82 932 aa25.19■■□□□ 1.62
DDX39A-207ENST00000588542 RAD17O75943 681 aa25.18■■□□□ 1.62
DDX39A-207ENST00000588542 METTL24Q5JXM2 366 aa25.18■■□□□ 1.62
DDX39A-207ENST00000588542 C15orf52Q6ZUT6 534 aaKnown RBP25.18■■□□□ 1.62
DDX39A-207ENST00000588542 SIL1Q9H173 461 aa25.18■■□□□ 1.62
DDX39A-207ENST00000588542 FBXO3Q9UK99 471 aa25.18■■□□□ 1.62
DDX39A-207ENST00000588542 GJA3Q9Y6H8 435 aa25.18■■□□□ 1.62
DDX39A-207ENST00000588542 CIAO1O76071 339 aa25.17■■□□□ 1.62
DDX39A-207ENST00000588542 ATP8B2P98198 1209 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms