RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 BLOC1S2Q6QNY1 142 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 COL24A1Q17RW2 1714 aa16.71■□□□□ 0.27
NEDD4L-223ENST00000588516 KIF3CO14782 793 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 OFD1O75665 1012 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 SASH1O94885 1247 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 TPM3P06753 285 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 LRRFIP1Q32MZ4 808 aaKnown RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
NEDD4L-223ENST00000588516 QSER1Q2KHR3 1735 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 IGKV5-2P06315 115 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 GJB2P29033 226 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 PTH1RQ03431 593 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 RABL6Q3YEC7 729 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 COL13A1Q5TAT6 717 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 MYD88Q99836 296 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 IL25Q9H293 177 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 ZKSCAN5Q9Y2L8 839 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
NEDD4L-223ENST00000588516 LAMB4A4D0S4 1761 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 ELP1O95163 1332 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 SLC27A2O14975 620 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 CABP4P57796 275 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 KRT85P78386 507 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 COL23A1Q86Y22 540 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
NEDD4L-223ENST00000588516 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 RPS6KB1P23443 525 aa16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
NEDD4L-223ENST00000588516 C5P01031 1676 aa16.66■□□□□ 0.26
NEDD4L-223ENST00000588516 USPL1Q5W0Q7 1092 aa16.66■□□□□ 0.26
NEDD4L-223ENST00000588516 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-223ENST00000588516 MTMR6Q9Y217 621 aa16.66■□□□□ 0.26
NEDD4L-223ENST00000588516 MYL6BP14649 208 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 CNPY2Q9Y2B0 182 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
NEDD4L-223ENST00000588516 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 TOMM70O94826 608 aa16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 PRELPP51888 382 aa16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 ZNF496Q96IT1 587 aaPredicted RBP16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 HAUS7Q99871 368 aa16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
NEDD4L-223ENST00000588516 TCHHQ07283 1943 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 RRP9O43818 475 aaKnown RBP16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 CAVIN2O95810 425 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 HELLSQ9NRZ9 838 aa16.63■□□□□ 0.25
NEDD4L-223ENST00000588516 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 A0A087WZG4 1122 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 GOLGA6L6A8MZA4 724 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 TAF5LO75529 589 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 CCDC192P0DO97 292 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 ME3Q16798 604 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 SIL1Q9H173 461 aa16.62■□□□□ 0.25
NEDD4L-223ENST00000588516 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms