RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 EPHX2P34913 555 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
TPM4-209ENST00000588483 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 UFL1O94874 794 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
TPM4-209ENST00000588483 TNIP1Q15025 636 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 C9orf78Q9NZ63 289 aaPredicted RBP13.28□□□□□ -0.28
TPM4-209ENST00000588483 ANKIB1Q9P2G1 1089 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 MED23Q9ULK4 1368 aa13.28□□□□□ -0.28
TPM4-209ENST00000588483 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
TPM4-209ENST00000588483 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
TPM4-209ENST00000588483 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
TPM4-209ENST00000588483 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
TPM4-209ENST00000588483 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
TPM4-209ENST00000588483 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
TPM4-209ENST00000588483 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
TPM4-209ENST00000588483 GPRC5DQ9NZD1 345 aa13.27□□□□□ -0.29
TPM4-209ENST00000588483 GJA3Q9Y6H8 435 aa13.27□□□□□ -0.29
TPM4-209ENST00000588483 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
TPM4-209ENST00000588483 ECE2O60344 883 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 PCNTO95613 3336 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 NBPF7P0C2Y1 421 aaPredicted RBP13.26□□□□□ -0.29
TPM4-209ENST00000588483 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
TPM4-209ENST00000588483 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
TPM4-209ENST00000588483 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
TPM4-209ENST00000588483 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 DPF2Q92785 391 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 PASKQ96RG2 1323 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 DBNDD1Q9H9R9 158 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
TPM4-209ENST00000588483 RAD17O75943 681 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 RPS12P25398 132 aaKnown RBP13.25□□□□□ -0.29
TPM4-209ENST00000588483 EPS15P42566 896 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
TPM4-209ENST00000588483 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
TPM4-209ENST00000588483 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 GPR101Q96P66 508 aaPredicted RBP13.25□□□□□ -0.29
TPM4-209ENST00000588483 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
TPM4-209ENST00000588483 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
TPM4-209ENST00000588483 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 PSMD14O00487 310 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
TPM4-209ENST00000588483 VIL1P09327 827 aaKnown RBP13.24□□□□□ -0.29
TPM4-209ENST00000588483 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 C15orf52Q6ZUT6 534 aaKnown RBP13.24□□□□□ -0.29
TPM4-209ENST00000588483 PODNQ7Z5L7 613 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 DNAJC5GQ8N7S2 189 aa13.24□□□□□ -0.29
TPM4-209ENST00000588483 API5Q9BZZ5 524 aaKnown RBP13.24□□□□□ -0.29
TPM4-209ENST00000588483 NOB1Q9ULX3 412 aaKnown RBP13.24□□□□□ -0.29
TPM4-209ENST00000588483 CHRNDQ07001 517 aa13.23□□□□□ -0.29
TPM4-209ENST00000588483 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
TPM4-209ENST00000588483 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
TPM4-209ENST00000588483 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
TPM4-209ENST00000588483 BICC1Q9H694 974 aaKnown RBP13.23□□□□□ -0.29
TPM4-209ENST00000588483 PGAP2Q9UHJ9 254 aa13.23□□□□□ -0.29
TPM4-209ENST00000588483 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
TPM4-209ENST00000588483 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
TPM4-209ENST00000588483 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
TPM4-209ENST00000588483 AGBL3Q8NEM8 1001 aa13.21□□□□□ -0.29
TPM4-209ENST00000588483 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
TPM4-209ENST00000588483 GMLQ99445 158 aa13.21□□□□□ -0.29
TPM4-209ENST00000588483 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
TPM4-209ENST00000588483 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
TPM4-209ENST00000588483 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.29
TPM4-209ENST00000588483 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
TPM4-209ENST00000588483 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
TPM4-209ENST00000588483 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
TPM4-209ENST00000588483 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
TPM4-209ENST00000588483 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
TPM4-209ENST00000588483 CNTROBQ8N137 903 aa13.2□□□□□ -0.3
TPM4-209ENST00000588483 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
TPM4-209ENST00000588483 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
TPM4-209ENST00000588483 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
TPM4-209ENST00000588483 H7C1D1 291 aa13.19□□□□□ -0.3
TPM4-209ENST00000588483 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
TPM4-209ENST00000588483 MMP14P50281 582 aa13.19□□□□□ -0.3
TPM4-209ENST00000588483 HIRAP54198 1017 aaPredicted RBP13.19□□□□□ -0.3
TPM4-209ENST00000588483 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
TPM4-209ENST00000588483 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
TPM4-209ENST00000588483 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
TPM4-209ENST00000588483 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
TPM4-209ENST00000588483 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms