RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 BTAF1O14981 1849 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 MYH3P11055 1940 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 IFIT1P09914 478 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 ZKSCAN1P17029 563 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 IGHMBP2P38935 993 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 KCNJ4P48050 445 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 ATP2B3Q16720 1220 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 LRRC24Q50LG9 513 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 TTC39AQ5SRH9 613 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 ZNF772Q68DY9 489 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 ZNF594Q96JF6 807 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 MPHOSPH8Q99549 860 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 SLKQ9H2G2 1235 aaPredicted RBP10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 SNRKQ9NRH2 765 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
NEDD4L-221ENST00000588066 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.71
NEDD4L-221ENST00000588066 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 GTF2E1P29083 439 aaPredicted RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 DNAJC2Q99543 621 aaKnown RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 PUS3Q9BZE2 481 aaKnown RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 LSG1Q9H089 658 aaKnown RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 GREM2Q9H772 168 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 CWC22Q9HCG8 908 aaKnown RBP10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 RIPOR2Q9Y4F9 1068 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 SPEF2Q9C093 1822 aa10.58□□□□□ -0.72
NEDD4L-221ENST00000588066 GNPATO15228 680 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 NTSR2O95665 410 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 SLC5A1P13866 664 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 PSMA5P28066 241 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 NEK4P51957 841 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 TIMM10P62072 90 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 ZSCAN25Q6NSZ9 544 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 XAGE2Q96GT9 111 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 ZNF512BQ96KM6 892 aaPredicted RBP10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 SETDB2Q96T68 719 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 PAG1Q9NWQ8 432 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 HMG20BQ9P0W2 317 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 BCORQ6W2J9 1755 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 CCDC171Q6TFL3 1326 aa10.57□□□□□ -0.72
NEDD4L-221ENST00000588066 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 PDE8BO95263 885 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 PTMSP20962 102 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 SSFA2P28290 1259 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 KRT32Q14532 448 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 TTF1Q15361 905 aaPredicted RBP10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 PUM3Q15397 648 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 SLC10A5Q5PT55 438 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 LPIN2Q92539 896 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.56□□□□□ -0.721e-6■■■■□ 20.5
NEDD4L-221ENST00000588066 ANTXR1Q9H6X2 564 aa10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
NEDD4L-221ENST00000588066 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 GOLIM4O00461 696 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 RFC4P35249 363 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 NUCB2P80303 420 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 MAP4K1Q92918 833 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 KCNB2Q92953 911 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 LY75O60449 1722 aa10.55□□□□□ -0.72
NEDD4L-221ENST00000588066 LAMB2P55268 1798 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 MED23Q9ULK4 1368 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 RNF113AO15541 343 aaKnown RBP10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 USPL1Q5W0Q7 1092 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 DDX46Q7L014 1031 aaKnown RBP10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 NBPF5PQ86XG9 351 aaPredicted RBP10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 RBM8AQ9Y5S9 174 aaKnown RBP10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 SBF2Q86WG5 1849 aa10.54□□□□□ -0.72
NEDD4L-221ENST00000588066 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 A0A0D9SFI3 127 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 NPHP1O15259 732 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 GBP4Q96PP9 640 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 GNL3LQ9NVN8 582 aaKnown RBP10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
NEDD4L-221ENST00000588066 LRP5O75197 1615 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms