RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
SMARCA4-213ENST00000587988 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-213ENST00000587988 EYA2O00167 538 aa13.32□□□□□ -0.28
SMARCA4-213ENST00000587988 CHRNDQ07001 517 aa13.32□□□□□ -0.28
SMARCA4-213ENST00000587988 ATG9AQ7Z3C6 839 aa13.32□□□□□ -0.28
SMARCA4-213ENST00000587988 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-213ENST00000587988 TAF5LO75529 589 aa13.31□□□□□ -0.28
SMARCA4-213ENST00000587988 AAMPQ13685 434 aa13.31□□□□□ -0.28
SMARCA4-213ENST00000587988 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
SMARCA4-213ENST00000587988 NSFL1CQ9UNZ2 370 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-213ENST00000587988 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
SMARCA4-213ENST00000587988 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 SNAP23O00161 211 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 NFKBIEO00221 500 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 HMMRO75330 724 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 SURF6O75683 361 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 SOGA3Q5TF21 947 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 MPNDQ8N594 471 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 POLLQ9UGP5 575 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
SMARCA4-213ENST00000587988 DUOX1Q9NRD9 1551 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 CIAO1O76071 339 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 PRELPP51888 382 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 RASSF7Q02833 373 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 GPR101Q96P66 508 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 TMX4Q9H1E5 349 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-213ENST00000587988 SASH1O94885 1247 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 NEFLP07196 543 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 TBC1D16Q8TBP0 767 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 RTFDC1Q9BY42 306 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 XDHP47989 1333 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
SMARCA4-213ENST00000587988 GRIN3BO60391 1043 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 IGHDP01880 384 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 TFCP2Q12800 502 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 PSMD1Q99460 953 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
SMARCA4-213ENST00000587988 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 UFL1O94874 794 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 PDE8BO95263 885 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 TAOK3Q9H2K8 898 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
SMARCA4-213ENST00000587988 SBF1O95248 1867 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 APBB1O00213 710 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 FGFR2P21802 821 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 KLRK1P26718 216 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
SMARCA4-213ENST00000587988 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 IARSP41252 1262 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 KCNJ4P48050 445 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 AOC3Q16853 763 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 COL4A5P29400 1685 aa13.24□□□□□ -0.29
SMARCA4-213ENST00000587988 UTRNP46939 3433 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 TIMM10P62072 90 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 WASHC4Q2M389 1173 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
SMARCA4-213ENST00000587988 SMARCA5O60264 1052 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 LPIN2Q92539 896 aa13.22□□□□□ -0.29
SMARCA4-213ENST00000587988 KIF1BPQ96EK5 621 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms