RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 RAB11FIP3O75154 756 aa31.11■■■□□ 2.57
CAPNS1-204ENST00000587718 SSH3Q8TE77 659 aa31.11■■■□□ 2.57
CAPNS1-204ENST00000587718 DNAAF4Q8WXU2 420 aa31.11■■■□□ 2.57
CAPNS1-204ENST00000587718 LRRCC1Q9C099 1032 aa31.11■■■□□ 2.57
CAPNS1-204ENST00000587718 SALL3Q9BXA9 1300 aa31.1■■■□□ 2.57
CAPNS1-204ENST00000587718 ALDH1L1O75891 902 aa31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 HTRA3P83110 453 aa31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 IARSP41252 1262 aaKnown RBP31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 SLC51AQ86UW1 340 aa31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 PLBD2Q8NHP8 589 aa31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 L3MBTL3Q96JM7 780 aaPredicted RBP31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 CHMP5Q9NZZ3 219 aa31.09■■■□□ 2.57
CAPNS1-204ENST00000587718 BEND3Q5T5X7 828 aa31.08■■■□□ 2.57
CAPNS1-204ENST00000587718 STAP2Q9UGK3 403 aa31.08■■■□□ 2.57
CAPNS1-204ENST00000587718 FZD9O00144 591 aa31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 PDE1AP54750 535 aa31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 POLA2Q14181 598 aa31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 ANKRD13DQ6ZTN6 518 aa31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 PHAXQ9H814 394 aaKnown RBP31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 HYPKQ9NX55 129 aa31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 CIZ1Q9ULV3 898 aaPredicted RBP31.07■■■□□ 2.56
CAPNS1-204ENST00000587718 ANKRD36CQ5JPF3 1778 aa31.06■■■□□ 2.56
CAPNS1-204ENST00000587718 GRIPAP1Q4V328 841 aa31.06■■■□□ 2.56
CAPNS1-204ENST00000587718 KIF2CQ99661 725 aa31.06■■■□□ 2.56
CAPNS1-204ENST00000587718 LRRFIP2Q9Y608 721 aaKnown RBP31.06■■■□□ 2.56
CAPNS1-204ENST00000587718 ZNF541Q9H0D2 1346 aa31.06■■■□□ 2.56
CAPNS1-204ENST00000587718 SDSP20132 328 aa31.05■■■□□ 2.56
CAPNS1-204ENST00000587718 PPEF1O14829 653 aaPredicted RBP31.05■■■□□ 2.56
CAPNS1-204ENST00000587718 HSP90AB4PQ58FF6 505 aa31.05■■■□□ 2.56
CAPNS1-204ENST00000587718 IL27Q8NEV9 243 aa31.05■■■□□ 2.56
CAPNS1-204ENST00000587718 TRMT112Q9UI30 125 aaKnown RBP31.05■■■□□ 2.56
CAPNS1-204ENST00000587718 REC8O95072 547 aa31.04■■■□□ 2.56
CAPNS1-204ENST00000587718 HCLS1P14317 486 aaPredicted RBP31.04■■■□□ 2.56
CAPNS1-204ENST00000587718 ISCA1Q9BUE6 129 aa31.04■■■□□ 2.56
CAPNS1-204ENST00000587718 RABEP1Q15276 862 aa31.03■■■□□ 2.56
CAPNS1-204ENST00000587718 SH3TC1Q8TE82 1336 aa31.03■■■□□ 2.56
CAPNS1-204ENST00000587718 EPB41L2O43491 1005 aaKnown RBP31.02■■■□□ 2.56
CAPNS1-204ENST00000587718 SMARCA5O60264 1052 aaPredicted RBP31.02■■■□□ 2.56
CAPNS1-204ENST00000587718 POTEIP0CG38 1075 aa31.02■■■□□ 2.56
CAPNS1-204ENST00000587718 POTEJP0CG39 1038 aa31.02■■■□□ 2.56
CAPNS1-204ENST00000587718 MTX1Q13505 466 aa31.02■■■□□ 2.56
CAPNS1-204ENST00000587718 PNMA6EA0A0J9YXQ4 647 aa31.01■■■□□ 2.56
CAPNS1-204ENST00000587718 IQCA1LA6NCM1 817 aa31.01■■■□□ 2.56
CAPNS1-204ENST00000587718 OTUD7AQ8TE49 926 aaPredicted RBP31.01■■■□□ 2.56
CAPNS1-204ENST00000587718 SLKQ9H2G2 1235 aaPredicted RBP31.01■■■□□ 2.56
CAPNS1-204ENST00000587718 ATP6V0A2Q9Y487 856 aa31.01■■■□□ 2.56
CAPNS1-204ENST00000587718 COL4A5P29400 1685 aa31.01■■■□□ 2.55
CAPNS1-204ENST00000587718 KSR2Q6VAB6 950 aa31■■■□□ 2.55
CAPNS1-204ENST00000587718 KLRG1Q96E93 195 aa31■■■□□ 2.55
CAPNS1-204ENST00000587718 USP26Q9BXU7 913 aa31■■■□□ 2.55
CAPNS1-204ENST00000587718 PI4KAP2A4QPH2 592 aa31■■■□□ 2.55
CAPNS1-204ENST00000587718 FRAT2O75474 233 aaPredicted RBP31■■■□□ 2.55
CAPNS1-204ENST00000587718 DDX58O95786 925 aaKnown RBP31■■■□□ 2.55
CAPNS1-204ENST00000587718 PI4KAP1Q8N8J0 262 aa31■■■□□ 2.55
CAPNS1-204ENST00000587718 TAF1DQ9H5J8 278 aaPredicted RBP31■■■□□ 2.55
CAPNS1-204ENST00000587718 CHADLQ6NUI6 762 aa30.99■■■□□ 2.55
CAPNS1-204ENST00000587718 JDP2Q8WYK2 163 aa30.99■■■□□ 2.55
CAPNS1-204ENST00000587718 BBOX1O75936 387 aa30.98■■■□□ 2.55
CAPNS1-204ENST00000587718 MX1P20591 662 aa30.98■■■□□ 2.55
CAPNS1-204ENST00000587718 DDIT3P35638 169 aa30.98■■■□□ 2.55
CAPNS1-204ENST00000587718 TRIM28Q13263 835 aaKnown RBP30.98■■■□□ 2.55
CAPNS1-204ENST00000587718 EXOC6BQ9Y2D4 811 aa30.98■■■□□ 2.55
CAPNS1-204ENST00000587718 ATP5J2-PTCD1G3V325 749 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 ERC2O15083 957 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 GSE1Q14687 1217 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 GPC2Q8N158 579 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 SCN4AP35499 1836 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 LAMB2P55268 1798 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 SP8Q8IXZ3 490 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 JMYQ8N9B5 988 aa30.96■■■□□ 2.55
CAPNS1-204ENST00000587718 UTYO14607 1347 aa30.95■■■□□ 2.54
CAPNS1-204ENST00000587718 KIF1BPQ96EK5 621 aa30.95■■■□□ 2.54
CAPNS1-204ENST00000587718 FAM89AQ96GI7 184 aa30.95■■■□□ 2.54
CAPNS1-204ENST00000587718 RTFDC1Q9BY42 306 aaPredicted RBP30.95■■■□□ 2.54
CAPNS1-204ENST00000587718 K7ELQ4 463 aaPredicted RBP30.94■■■□□ 2.54
CAPNS1-204ENST00000587718 LARGE2Q8N3Y3 721 aa30.94■■■□□ 2.54
CAPNS1-204ENST00000587718 HACL1Q9UJ83 578 aa30.94■■■□□ 2.54
CAPNS1-204ENST00000587718 DDX46Q7L014 1031 aaKnown RBP30.93■■■□□ 2.54
CAPNS1-204ENST00000587718 LDHDQ86WU2 507 aa30.93■■■□□ 2.54
CAPNS1-204ENST00000587718 LINS1Q8NG48 757 aa30.93■■■□□ 2.54
CAPNS1-204ENST00000587718 VPS33BQ9H267 617 aa30.93■■■□□ 2.54
CAPNS1-204ENST00000587718 APBB1O00213 710 aa30.92■■■□□ 2.54
CAPNS1-204ENST00000587718 GRAPQ13588 217 aa30.92■■■□□ 2.54
CAPNS1-204ENST00000587718 GRAPLQ8TC17 118 aaPredicted RBP30.92■■■□□ 2.54
CAPNS1-204ENST00000587718 SF3B3Q15393 1217 aaKnown RBP30.92■■■□□ 2.54
CAPNS1-204ENST00000587718 TMX4Q9H1E5 349 aaPredicted RBP30.92■■■□□ 2.54
CAPNS1-204ENST00000587718 EIF6P56537 245 aaKnown RBP30.91■■■□□ 2.54
CAPNS1-204ENST00000587718 RIC3Q7Z5B4 369 aa30.91■■■□□ 2.54
CAPNS1-204ENST00000587718 EPHX2P34913 555 aa30.9■■■□□ 2.54
CAPNS1-204ENST00000587718 DDX60Q8IY21 1712 aaKnown RBP30.89■■■□□ 2.54
CAPNS1-204ENST00000587718 MAP3K2Q9Y2U5 619 aa30.89■■■□□ 2.54
CAPNS1-204ENST00000587718 PPIP5K2O43314 1243 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 AOC3Q16853 763 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 IL17RAQ96F46 866 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 SRGAP3O43295 1099 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 NBPF7P0C2Y1 421 aaPredicted RBP30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 ERC1Q8IUD2 1116 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 MPNDQ8N594 471 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 SUPT20HQ8NEM7 779 aa30.88■■■□□ 2.53
CAPNS1-204ENST00000587718 RHPN1Q8TCX5 695 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms