RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KCNQ5Q9NR82 932 aa18.21■□□□□ 0.51
DNMT1-213ENST00000587604 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
DNMT1-213ENST00000587604 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
DNMT1-213ENST00000587604 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
DNMT1-213ENST00000587604 GNAI1P63096 354 aa18.2■□□□□ 0.5
DNMT1-213ENST00000587604 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
DNMT1-213ENST00000587604 NOGQ13253 232 aa18.2■□□□□ 0.5
DNMT1-213ENST00000587604 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
DNMT1-213ENST00000587604 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 APAF1O14727 1248 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 EGFRP00533 1210 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 VIL1P09327 827 aaKnown RBP18.19■□□□□ 0.5
DNMT1-213ENST00000587604 HUNKP57058 714 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 RBM26Q5T8P6 1007 aaKnown RBP18.19■□□□□ 0.5
DNMT1-213ENST00000587604 CCDC191Q8NCU4 936 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
DNMT1-213ENST00000587604 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
DNMT1-213ENST00000587604 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-213ENST00000587604 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-213ENST00000587604 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
DNMT1-213ENST00000587604 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
DNMT1-213ENST00000587604 MYD88Q99836 296 aa18.18■□□□□ 0.5
DNMT1-213ENST00000587604 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
DNMT1-213ENST00000587604 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-213ENST00000587604 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
DNMT1-213ENST00000587604 CCDC85CA6NKD9 419 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 G3V3G9 751 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 PDE8AO60658 829 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 C2orf69Q8N8R5 385 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 GBA2Q9HCG7 927 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-213ENST00000587604 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
DNMT1-213ENST00000587604 UFL1O94874 794 aa18.16■□□□□ 0.5
DNMT1-213ENST00000587604 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
DNMT1-213ENST00000587604 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
DNMT1-213ENST00000587604 ZIC5Q96T25 663 aa18.16■□□□□ 0.5
DNMT1-213ENST00000587604 CWC25Q9NXE8 425 aaPredicted RBP18.16■□□□□ 0.5
DNMT1-213ENST00000587604 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
DNMT1-213ENST00000587604 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
DNMT1-213ENST00000587604 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
DNMT1-213ENST00000587604 CCDC102AQ96A19 550 aa18.15■□□□□ 0.5
DNMT1-213ENST00000587604 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
DNMT1-213ENST00000587604 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-213ENST00000587604 RGS19P49795 217 aa18.14■□□□□ 0.49
DNMT1-213ENST00000587604 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
DNMT1-213ENST00000587604 SULF1Q8IWU6 871 aa18.14■□□□□ 0.49
DNMT1-213ENST00000587604 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
DNMT1-213ENST00000587604 JARID2Q92833 1246 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-213ENST00000587604 ZNF280AP59817 542 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-213ENST00000587604 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
DNMT1-213ENST00000587604 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-213ENST00000587604 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
DNMT1-213ENST00000587604 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
DNMT1-213ENST00000587604 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
DNMT1-213ENST00000587604 PSME4Q14997 1843 aa18.12■□□□□ 0.49
DNMT1-213ENST00000587604 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-213ENST00000587604 GGA3Q9NZ52 723 aa18.12■□□□□ 0.49
DNMT1-213ENST00000587604 XDHP47989 1333 aa18.12■□□□□ 0.49
DNMT1-213ENST00000587604 ZNF609O15014 1411 aa18.12■□□□□ 0.49
DNMT1-213ENST00000587604 ATP2B4P23634 1241 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 SCARF1Q14162 830 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 MAP3K2Q9Y2U5 619 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 ASTN2O75129 1339 aaPredicted RBP18.11■□□□□ 0.49
DNMT1-213ENST00000587604 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
DNMT1-213ENST00000587604 KIF23Q02241 960 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-213ENST00000587604 MLLT1Q03111 559 aaPredicted RBP18.1■□□□□ 0.49
DNMT1-213ENST00000587604 DGKZQ13574 1117 aa18.1■□□□□ 0.49
DNMT1-213ENST00000587604 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
DNMT1-213ENST00000587604 GMLQ99445 158 aa18.1■□□□□ 0.49
DNMT1-213ENST00000587604 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
DNMT1-213ENST00000587604 SAGE1Q9NXZ1 904 aa18.1■□□□□ 0.49
DNMT1-213ENST00000587604 PI4KAP2A4QPH2 592 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 USP17L3A6NCW0 530 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 USP17L4A6NCW7 530 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 USP17L8P0C7I0 530 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 CTSWP56202 376 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 ANGEL2Q5VTE6 544 aaKnown RBP18.09■□□□□ 0.49
DNMT1-213ENST00000587604 USP17L1Q7RTZ2 530 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 PI4KAP1Q8N8J0 262 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 MYH3P11055 1940 aa18.09■□□□□ 0.49
DNMT1-213ENST00000587604 IGKV5-2P06315 115 aa18.08■□□□□ 0.48
DNMT1-213ENST00000587604 SLC10A3P09131 477 aa18.08■□□□□ 0.48
DNMT1-213ENST00000587604 TTLL11Q8NHH1 800 aa18.08■□□□□ 0.48
DNMT1-213ENST00000587604 MYOZ2Q9NPC6 264 aa18.08■□□□□ 0.48
DNMT1-213ENST00000587604 BSDC1Q9NW68 430 aaPredicted RBP18.08■□□□□ 0.48
DNMT1-213ENST00000587604 FKBP1BP68106 108 aa18.07■□□□□ 0.48
DNMT1-213ENST00000587604 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
DNMT1-213ENST00000587604 RNF186Q9NXI6 227 aa18.07■□□□□ 0.48
DNMT1-213ENST00000587604 MINPP1Q9UNW1 487 aa18.07■□□□□ 0.48
DNMT1-213ENST00000587604 PITPNM2Q9BZ72 1349 aa18.06■□□□□ 0.48
DNMT1-213ENST00000587604 WTIPA6NIX2 430 aaPredicted RBP18.06■□□□□ 0.48
DNMT1-213ENST00000587604 TRPA1O75762 1119 aa18.06■□□□□ 0.48
DNMT1-213ENST00000587604 REM2Q8IYK8 340 aaPredicted RBP18.06■□□□□ 0.48
DNMT1-213ENST00000587604 CSRNP1Q96S65 589 aa18.06■□□□□ 0.48
DNMT1-213ENST00000587604 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
DNMT1-213ENST00000587604 GREM2Q9H772 168 aa18.06■□□□□ 0.48
DNMT1-213ENST00000587604 MED23Q9ULK4 1368 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms