RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 RBM17Q96I25 401 aaKnown RBP22.73■■□□□ 1.23
H3F3B-206ENST00000587560 ZNF594Q96JF6 807 aaPredicted RBP22.73■■□□□ 1.23
H3F3B-206ENST00000587560 CHMP3Q9Y3E7 222 aa22.73■■□□□ 1.23
H3F3B-206ENST00000587560 DPEP1P16444 411 aa22.72■■□□□ 1.23
H3F3B-206ENST00000587560 DDX46Q7L014 1031 aaKnown RBP22.72■■□□□ 1.23
H3F3B-206ENST00000587560 ATG9AQ7Z3C6 839 aa22.72■■□□□ 1.23
H3F3B-206ENST00000587560 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
H3F3B-206ENST00000587560 CDC5LQ99459 802 aaKnown RBP22.72■■□□□ 1.23
H3F3B-206ENST00000587560 RWDD1Q9H446 243 aaPredicted RBP22.72■■□□□ 1.23
H3F3B-206ENST00000587560 CIAO1O76071 339 aa22.71■■□□□ 1.23
H3F3B-206ENST00000587560 RPS8P62241 208 aaKnown RBP22.71■■□□□ 1.23
H3F3B-206ENST00000587560 RIPOR2Q9Y4F9 1068 aa22.71■■□□□ 1.23
H3F3B-206ENST00000587560 LTBP1Q14766 1721 aa22.71■■□□□ 1.23
H3F3B-206ENST00000587560 EYA2O00167 538 aa22.7■■□□□ 1.22
H3F3B-206ENST00000587560 PUS3Q9BZE2 481 aaKnown RBP22.7■■□□□ 1.22
H3F3B-206ENST00000587560 BSDC1Q9NW68 430 aaPredicted RBP22.7■■□□□ 1.22
H3F3B-206ENST00000587560 LRRC24Q50LG9 513 aa22.69■■□□□ 1.22
H3F3B-206ENST00000587560 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
H3F3B-206ENST00000587560 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
H3F3B-206ENST00000587560 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
H3F3B-206ENST00000587560 A0A0G2JLW4 131 aa22.68■■□□□ 1.22
H3F3B-206ENST00000587560 BBOX1O75936 387 aa22.68■■□□□ 1.22
H3F3B-206ENST00000587560 ALDH1B1P30837 517 aa22.68■■□□□ 1.22
H3F3B-206ENST00000587560 C7orf43Q8WVR3 580 aa22.68■■□□□ 1.22
H3F3B-206ENST00000587560 SURF6O75683 361 aaKnown RBP22.67■■□□□ 1.22
H3F3B-206ENST00000587560 SASH1O94885 1247 aa22.67■■□□□ 1.22
H3F3B-206ENST00000587560 VGLL2Q8N8G2 317 aa22.67■■□□□ 1.22
H3F3B-206ENST00000587560 CNKSR1Q969H4 720 aa22.67■■□□□ 1.22
H3F3B-206ENST00000587560 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
H3F3B-206ENST00000587560 IGHMBP2P38935 993 aaKnown RBP22.66■■□□□ 1.22
H3F3B-206ENST00000587560 LDHAL6AQ6ZMR3 332 aa22.66■■□□□ 1.22
H3F3B-206ENST00000587560 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
H3F3B-206ENST00000587560 EXOC6BQ9Y2D4 811 aa22.66■■□□□ 1.22
H3F3B-206ENST00000587560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.66■■□□□ 1.22
H3F3B-206ENST00000587560 ARFGEF1Q9Y6D6 1849 aa22.66■■□□□ 1.22
H3F3B-206ENST00000587560 IL15P40933 162 aaPredicted RBP22.65■■□□□ 1.22
H3F3B-206ENST00000587560 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
H3F3B-206ENST00000587560 SLC51AQ86UW1 340 aa22.65■■□□□ 1.22
H3F3B-206ENST00000587560 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
H3F3B-206ENST00000587560 SIL1Q9H173 461 aa22.65■■□□□ 1.22
H3F3B-206ENST00000587560 RAB11FIP3O75154 756 aa22.64■■□□□ 1.21
H3F3B-206ENST00000587560 HSP90AB4PQ58FF6 505 aa22.64■■□□□ 1.21
H3F3B-206ENST00000587560 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
H3F3B-206ENST00000587560 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.21
H3F3B-206ENST00000587560 ZNF622Q969S3 477 aaKnown RBP eCLIP22.64■■□□□ 1.214e-13■□□□□ 10.8
H3F3B-206ENST00000587560 MINPP1Q9UNW1 487 aa22.64■■□□□ 1.21
H3F3B-206ENST00000587560 HSPA1AP0DMV8 641 aaKnown RBP22.63■■□□□ 1.21
H3F3B-206ENST00000587560 HSPA1BP0DMV9 641 aaKnown RBP22.63■■□□□ 1.21
H3F3B-206ENST00000587560 G3BP1Q13283 466 aaKnown RBP eCLIP22.63■■□□□ 1.212e-8■□□□□ 10.3
H3F3B-206ENST00000587560 SP8Q8IXZ3 490 aa22.63■■□□□ 1.21
H3F3B-206ENST00000587560 TTLL6Q8N841 843 aa22.63■■□□□ 1.21
H3F3B-206ENST00000587560 MPHOSPH8Q99549 860 aa22.63■■□□□ 1.21
H3F3B-206ENST00000587560 ATP6V0A2Q9Y487 856 aa22.63■■□□□ 1.21
H3F3B-206ENST00000587560 MROH5Q6ZUA9 1318 aa22.62■■□□□ 1.21
H3F3B-206ENST00000587560 PPEF1O14829 653 aaPredicted RBP22.62■■□□□ 1.21
H3F3B-206ENST00000587560 CENPQQ7L2Z9 268 aaPredicted RBP22.62■■□□□ 1.21
H3F3B-206ENST00000587560 CNNM1Q9NRU3 951 aa22.62■■□□□ 1.21
H3F3B-206ENST00000587560 PIM2Q9P1W9 311 aa22.62■■□□□ 1.21
H3F3B-206ENST00000587560 DUOX1Q9NRD9 1551 aa22.62■■□□□ 1.21
H3F3B-206ENST00000587560 ARAP2Q8WZ64 1704 aa22.62■■□□□ 1.21
H3F3B-206ENST00000587560 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
H3F3B-206ENST00000587560 RHPN1Q8TCX5 695 aa22.61■■□□□ 1.21
H3F3B-206ENST00000587560 CHRNDQ07001 517 aa22.6■■□□□ 1.21
H3F3B-206ENST00000587560 KIF1BPQ96EK5 621 aa22.6■■□□□ 1.21
H3F3B-206ENST00000587560 GPR108Q9NPR9 543 aa22.6■■□□□ 1.21
H3F3B-206ENST00000587560 FGFR2P21802 821 aa22.59■■□□□ 1.21
H3F3B-206ENST00000587560 NUCB1Q02818 461 aa22.59■■□□□ 1.21
H3F3B-206ENST00000587560 TFCP2Q12800 502 aa22.59■■□□□ 1.21
H3F3B-206ENST00000587560 PODXL2Q9NZ53 605 aa22.59■■□□□ 1.21
H3F3B-206ENST00000587560 FER1L6Q2WGJ9 1857 aa22.59■■□□□ 1.21
H3F3B-206ENST00000587560 PDE8BO95263 885 aa22.58■■□□□ 1.21
H3F3B-206ENST00000587560 IRS2Q9Y4H2 1338 aa22.57■■□□□ 1.2
H3F3B-206ENST00000587560 ZNF609O15014 1411 aa22.57■■□□□ 1.2
H3F3B-206ENST00000587560 OLFM4Q6UX06 510 aa22.57■■□□□ 1.2
H3F3B-206ENST00000587560 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
H3F3B-206ENST00000587560 LRRCC1Q9C099 1032 aa22.57■■□□□ 1.2
H3F3B-206ENST00000587560 ANKRD2Q9GZV1 360 aa22.57■■□□□ 1.2
H3F3B-206ENST00000587560 GPSM2P81274 684 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 DALRD3Q5D0E6 543 aaKnown RBP22.56■■□□□ 1.2
H3F3B-206ENST00000587560 METTL24Q5JXM2 366 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 NMRK2Q9NPI5 230 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 CEP126Q9P2H0 1117 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 XDHP47989 1333 aa22.56■■□□□ 1.2
H3F3B-206ENST00000587560 SMARCA5O60264 1052 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-206ENST00000587560 TAF5LO75529 589 aa22.55■■□□□ 1.2
H3F3B-206ENST00000587560 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-206ENST00000587560 HELBQ8NG08 1087 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-206ENST00000587560 RTFDC1Q9BY42 306 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-206ENST00000587560 WTIPA6NIX2 430 aaPredicted RBP22.54■■□□□ 1.2
H3F3B-206ENST00000587560 UBE4AQ14139 1066 aa22.54■■□□□ 1.2
H3F3B-206ENST00000587560 TNNI3KQ59H18 835 aa22.54■■□□□ 1.2
H3F3B-206ENST00000587560 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
H3F3B-206ENST00000587560 IL1RAPL2Q9NP60 686 aa22.54■■□□□ 1.2
H3F3B-206ENST00000587560 FPGT-TNNI3KV9GXZ4 949 aa22.54■■□□□ 1.2
H3F3B-206ENST00000587560 SALL3Q9BXA9 1300 aa22.54■■□□□ 1.2
H3F3B-206ENST00000587560 C21orf2O43822 256 aa22.53■■□□□ 1.2
H3F3B-206ENST00000587560 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
H3F3B-206ENST00000587560 ANKRD45Q5TZF3 282 aa22.53■■□□□ 1.2
H3F3B-206ENST00000587560 C15orf52Q6ZUT6 534 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms