RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
NFIX-208ENST00000587260 NLGN2Q8NFZ4 835 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 FHDC1Q9C0D6 1143 aaPredicted RBP18.44■□□□□ 0.54
NFIX-208ENST00000587260 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
NFIX-208ENST00000587260 PPEF1O14829 653 aaPredicted RBP18.43■□□□□ 0.54
NFIX-208ENST00000587260 TGFB2P61812 414 aa18.43■□□□□ 0.54
NFIX-208ENST00000587260 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
NFIX-208ENST00000587260 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
NFIX-208ENST00000587260 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
NFIX-208ENST00000587260 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
NFIX-208ENST00000587260 CIAO1O76071 339 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 KCNA3P22001 575 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 ALDH1B1P30837 517 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 CNKSR1Q969H4 720 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 KIF1BPQ96EK5 621 aa18.41■□□□□ 0.54
NFIX-208ENST00000587260 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
NFIX-208ENST00000587260 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
NFIX-208ENST00000587260 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
NFIX-208ENST00000587260 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
NFIX-208ENST00000587260 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
NFIX-208ENST00000587260 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
NFIX-208ENST00000587260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.4■□□□□ 0.54
NFIX-208ENST00000587260 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
NFIX-208ENST00000587260 SASH1O94885 1247 aa18.39■□□□□ 0.54
NFIX-208ENST00000587260 PDE4AP27815 886 aa18.39■□□□□ 0.54
NFIX-208ENST00000587260 TFCP2Q12800 502 aa18.39■□□□□ 0.54
NFIX-208ENST00000587260 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.54
NFIX-208ENST00000587260 IL1RAPL2Q9NP60 686 aa18.39■□□□□ 0.54
NFIX-208ENST00000587260 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.54
NFIX-208ENST00000587260 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.54
NFIX-208ENST00000587260 ARAP2Q8WZ64 1704 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 BBOX1O75936 387 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 CHRNDQ07001 517 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 OLFM4Q6UX06 510 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 TTLL6Q8N841 843 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 MINPP1Q9UNW1 487 aa18.39■□□□□ 0.53
NFIX-208ENST00000587260 MROH5Q6ZUA9 1318 aa18.38■□□□□ 0.53
NFIX-208ENST00000587260 TAF5LO75529 589 aa18.38■□□□□ 0.53
NFIX-208ENST00000587260 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
NFIX-208ENST00000587260 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
NFIX-208ENST00000587260 ZNF609O15014 1411 aa18.37■□□□□ 0.53
NFIX-208ENST00000587260 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
NFIX-208ENST00000587260 ATP6V0A2Q9Y487 856 aa18.37■□□□□ 0.53
NFIX-208ENST00000587260 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
NFIX-208ENST00000587260 DUOX1Q9NRD9 1551 aa18.36■□□□□ 0.53
NFIX-208ENST00000587260 TMC4Q7Z404 712 aa18.36■□□□□ 0.53
NFIX-208ENST00000587260 VGLL2Q8N8G2 317 aa18.36■□□□□ 0.53
NFIX-208ENST00000587260 SYT17Q9BSW7 474 aa18.36■□□□□ 0.53
NFIX-208ENST00000587260 CEP126Q9P2H0 1117 aa18.36■□□□□ 0.53
NFIX-208ENST00000587260 RGS3P49796 1198 aa18.35■□□□□ 0.53
NFIX-208ENST00000587260 GPSM2P81274 684 aa18.35■□□□□ 0.53
NFIX-208ENST00000587260 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
NFIX-208ENST00000587260 SNAP23O00161 211 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 C21orf2O43822 256 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 DALRD3Q5D0E6 543 aaKnown RBP18.34■□□□□ 0.53
NFIX-208ENST00000587260 SP8Q8IXZ3 490 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 ANKIB1Q9P2G1 1089 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 BCS1LQ9Y276 419 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
NFIX-208ENST00000587260 PDE8BO95263 885 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 TNNI3KQ59H18 835 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.53
NFIX-208ENST00000587260 CLASRPQ8N2M8 674 aaKnown RBP18.33■□□□□ 0.53
NFIX-208ENST00000587260 ANKRD2Q9GZV1 360 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.53
NFIX-208ENST00000587260 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 GPR108Q9NPR9 543 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.53
NFIX-208ENST00000587260 FPGT-TNNI3KV9GXZ4 949 aa18.33■□□□□ 0.53
NFIX-208ENST00000587260 XDHP47989 1333 aa18.33■□□□□ 0.52
NFIX-208ENST00000587260 WTIPA6NIX2 430 aaPredicted RBP18.33■□□□□ 0.52
NFIX-208ENST00000587260 KCNJ4P48050 445 aa18.33■□□□□ 0.52
NFIX-208ENST00000587260 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
NFIX-208ENST00000587260 ATP2B3Q16720 1220 aa18.33■□□□□ 0.52
NFIX-208ENST00000587260 AACSQ86V21 672 aa18.33■□□□□ 0.52
NFIX-208ENST00000587260 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
NFIX-208ENST00000587260 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
NFIX-208ENST00000587260 TLR7Q9NYK1 1049 aaKnown RBP18.32■□□□□ 0.52
NFIX-208ENST00000587260 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
NFIX-208ENST00000587260 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
NFIX-208ENST00000587260 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
NFIX-208ENST00000587260 A0A1B0GUL7 405 aa18.31■□□□□ 0.52
NFIX-208ENST00000587260 UFL1O94874 794 aa18.31■□□□□ 0.52
NFIX-208ENST00000587260 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
NFIX-208ENST00000587260 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
NFIX-208ENST00000587260 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
NFIX-208ENST00000587260 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
NFIX-208ENST00000587260 TIMM10P62072 90 aa18.3■□□□□ 0.52
NFIX-208ENST00000587260 CCDC93Q567U6 631 aa18.3■□□□□ 0.52
NFIX-208ENST00000587260 DPP8Q6V1X1 898 aaPredicted RBP18.3■□□□□ 0.52
NFIX-208ENST00000587260 MPNDQ8N594 471 aa18.3■□□□□ 0.52
NFIX-208ENST00000587260 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
NFIX-208ENST00000587260 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 IFIT2P09913 472 aaKnown RBP18.29■□□□□ 0.52
NFIX-208ENST00000587260 FGFR2P21802 821 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 KLRK1P26718 216 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 ADORA1P30542 326 aa18.29■□□□□ 0.52
NFIX-208ENST00000587260 PDE1AP54750 535 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms