RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 SDSP20132 328 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 LMNB1P20700 586 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 CTSWP56202 376 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 RASSF7Q02833 373 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
APOC1-201ENST00000586638 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
APOC1-201ENST00000586638 TLR7Q9NYK1 1049 aaKnown RBP12.48□□□□□ -0.41
APOC1-201ENST00000586638 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
APOC1-201ENST00000586638 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
APOC1-201ENST00000586638 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
APOC1-201ENST00000586638 H0YIN7 160 aa12.47□□□□□ -0.41
APOC1-201ENST00000586638 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
APOC1-201ENST00000586638 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
APOC1-201ENST00000586638 UTP14AQ9BVJ6 771 aaKnown RBP12.47□□□□□ -0.41
APOC1-201ENST00000586638 BCL2L12Q9HB09 334 aa12.47□□□□□ -0.41
APOC1-201ENST00000586638 COL4A1P02462 1669 aa12.47□□□□□ -0.41
APOC1-201ENST00000586638 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
APOC1-201ENST00000586638 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.41
APOC1-201ENST00000586638 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
APOC1-201ENST00000586638 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
APOC1-201ENST00000586638 TFCP2Q12800 502 aa12.46□□□□□ -0.41
APOC1-201ENST00000586638 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
APOC1-201ENST00000586638 PI4K2BQ8TCG2 481 aa12.46□□□□□ -0.41
APOC1-201ENST00000586638 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
APOC1-201ENST00000586638 CCDC8Q9H0W5 538 aaPredicted RBP12.46□□□□□ -0.41
APOC1-201ENST00000586638 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TAF1P21675 1872 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 PDE8AO60658 829 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
APOC1-201ENST00000586638 CSF1RP07333 972 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
APOC1-201ENST00000586638 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TNS4Q8IZW8 715 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
APOC1-201ENST00000586638 GREM2Q9H772 168 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
APOC1-201ENST00000586638 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 EYA2O00167 538 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
APOC1-201ENST00000586638 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 RILPL2Q969X0 211 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
APOC1-201ENST00000586638 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
APOC1-201ENST00000586638 ITGA6P23229 1130 aa12.43□□□□□ -0.42
APOC1-201ENST00000586638 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
APOC1-201ENST00000586638 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC1-201ENST00000586638 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
APOC1-201ENST00000586638 ARFGEF1Q9Y6D6 1849 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 POTECB2RU33 542 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 NFKBIEO00221 500 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 RGL2O15211 777 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 GLRX3O76003 335 aaKnown RBP12.42□□□□□ -0.42
APOC1-201ENST00000586638 CIAO1O76071 339 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 IL15P40933 162 aaPredicted RBP12.42□□□□□ -0.42
APOC1-201ENST00000586638 ERFEQ4G0M1 354 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 DBNDD2Q9BQY9 259 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
APOC1-201ENST00000586638 DBNLQ9UJU6 430 aaKnown RBP12.42□□□□□ -0.42
APOC1-201ENST00000586638 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
APOC1-201ENST00000586638 ERC2O15083 957 aa12.41□□□□□ -0.42
APOC1-201ENST00000586638 PDE6BP35913 854 aa12.41□□□□□ -0.42
APOC1-201ENST00000586638 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
APOC1-201ENST00000586638 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
APOC1-201ENST00000586638 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
APOC1-201ENST00000586638 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
APOC1-201ENST00000586638 C21orf2O43822 256 aa12.4□□□□□ -0.42
APOC1-201ENST00000586638 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
APOC1-201ENST00000586638 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
APOC1-201ENST00000586638 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
APOC1-201ENST00000586638 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
APOC1-201ENST00000586638 SEC31BQ9NQW1 1179 aa12.4□□□□□ -0.42
APOC1-201ENST00000586638 RTL9Q8NET4 1388 aa12.4□□□□□ -0.42
APOC1-201ENST00000586638 CHMLP26374 656 aa12.39□□□□□ -0.43
APOC1-201ENST00000586638 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
APOC1-201ENST00000586638 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
APOC1-201ENST00000586638 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
APOC1-201ENST00000586638 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
APOC1-201ENST00000586638 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
APOC1-201ENST00000586638 CARMIL3Q8ND23 1372 aa12.39□□□□□ -0.43
APOC1-201ENST00000586638 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 ADORA1P30542 326 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 NEUROD6Q96NK8 337 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms