RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PUS3Q9BZE2 481 aaKnown RBP21.03■□□□□ 0.96
PRKCSH-203ENST00000586486 CNNM1Q9NRU3 951 aa21.03■□□□□ 0.96
PRKCSH-203ENST00000586486 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.96
PRKCSH-203ENST00000586486 LRRC24Q50LG9 513 aa21.02■□□□□ 0.96
PRKCSH-203ENST00000586486 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
PRKCSH-203ENST00000586486 EXOC6BQ9Y2D4 811 aa21.02■□□□□ 0.96
PRKCSH-203ENST00000586486 ATP6V0A2Q9Y487 856 aa21.02■□□□□ 0.96
PRKCSH-203ENST00000586486 ERC1Q8IUD2 1116 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 SP8Q8IXZ3 490 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 SMC5Q8IY18 1101 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 MROH5Q6ZUA9 1318 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 SRCAPQ6ZRS2 3230 aa21.01■□□□□ 0.95
PRKCSH-203ENST00000586486 RAB11FIP3O75154 756 aa21■□□□□ 0.95
PRKCSH-203ENST00000586486 C7orf43Q8WVR3 580 aa21■□□□□ 0.95
PRKCSH-203ENST00000586486 MINPP1Q9UNW1 487 aa21■□□□□ 0.95
PRKCSH-203ENST00000586486 SNED1Q8TER0 1413 aa21■□□□□ 0.95
PRKCSH-203ENST00000586486 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
PRKCSH-203ENST00000586486 DALRD3Q5D0E6 543 aaKnown RBP21■□□□□ 0.95
PRKCSH-203ENST00000586486 CHRNDQ07001 517 aa20.99■□□□□ 0.95
PRKCSH-203ENST00000586486 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
PRKCSH-203ENST00000586486 CC2D2BQ6DHV5 1058 aa20.99■□□□□ 0.95
PRKCSH-203ENST00000586486 VGLL2Q8N8G2 317 aa20.99■□□□□ 0.95
PRKCSH-203ENST00000586486 SASH1O94885 1247 aa20.98■□□□□ 0.95
PRKCSH-203ENST00000586486 KIF1BPQ96EK5 621 aa20.98■□□□□ 0.95
PRKCSH-203ENST00000586486 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
PRKCSH-203ENST00000586486 METTL24Q5JXM2 366 aa20.97■□□□□ 0.95
PRKCSH-203ENST00000586486 CENPQQ7L2Z9 268 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-203ENST00000586486 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
PRKCSH-203ENST00000586486 DUOX1Q9NRD9 1551 aa20.97■□□□□ 0.95
PRKCSH-203ENST00000586486 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 SOGA3Q5TF21 947 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 RHPN1Q8TCX5 695 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 TMX4Q9H1E5 349 aaPredicted RBP20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 PODXL2Q9NZ53 605 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 CEP126Q9P2H0 1117 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 ARAP2Q8WZ64 1704 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 XDHP47989 1333 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 PDE8BO95263 885 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
PRKCSH-203ENST00000586486 TFCP2Q12800 502 aa20.95■□□□□ 0.94
PRKCSH-203ENST00000586486 GPR108Q9NPR9 543 aa20.95■□□□□ 0.94
PRKCSH-203ENST00000586486 ZNF609O15014 1411 aa20.95■□□□□ 0.94
PRKCSH-203ENST00000586486 FER1L6Q2WGJ9 1857 aa20.95■□□□□ 0.94
PRKCSH-203ENST00000586486 C21orf2O43822 256 aa20.94■□□□□ 0.94
PRKCSH-203ENST00000586486 CCDC93Q567U6 631 aa20.94■□□□□ 0.94
PRKCSH-203ENST00000586486 BCS1LQ9Y276 419 aa20.94■□□□□ 0.94
PRKCSH-203ENST00000586486 GPSM2P81274 684 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 ANKIB1Q9P2G1 1089 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 APBB1O00213 710 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 PUM3Q15397 648 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 HELBQ8NG08 1087 aaPredicted RBP20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 NSFL1CQ9UNZ2 370 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 AKAP2Q9Y2D5 859 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 LEMD3Q9Y2U8 911 aa20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.93■□□□□ 0.94
PRKCSH-203ENST00000586486 GOLGB1Q14789 3259 aaKnown RBP20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 TAF5LO75529 589 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 FGFR2P21802 821 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 UBE4AQ14139 1066 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 RTKN2Q8IZC4 609 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 MPNDQ8N594 471 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 WWC3Q9ULE0 1092 aa20.92■□□□□ 0.94
PRKCSH-203ENST00000586486 ATP2B4P23634 1241 aa20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 NUCB1Q02818 461 aa20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 DPP8Q6V1X1 898 aaPredicted RBP20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 RTFDC1Q9BY42 306 aaPredicted RBP20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 GGA1Q9UJY5 639 aa20.91■□□□□ 0.94
PRKCSH-203ENST00000586486 ATP2B3Q16720 1220 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 TNNI3KQ59H18 835 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 CLASRPQ8N2M8 674 aaKnown RBP20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 LPIN2Q92539 896 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 IL1RAPL2Q9NP60 686 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 FPGT-TNNI3KV9GXZ4 949 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 ZNF804BA4D1E1 1349 aa20.9■□□□□ 0.94
PRKCSH-203ENST00000586486 TBC1D16Q8TBP0 767 aa20.89■□□□□ 0.94
PRKCSH-203ENST00000586486 PSMD1Q99460 953 aa20.89■□□□□ 0.94
PRKCSH-203ENST00000586486 A0A1B0GUL7 405 aa20.89■□□□□ 0.93
PRKCSH-203ENST00000586486 UFL1O94874 794 aa20.89■□□□□ 0.93
PRKCSH-203ENST00000586486 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.93
PRKCSH-203ENST00000586486 POLLQ9UGP5 575 aa20.89■□□□□ 0.93
PRKCSH-203ENST00000586486 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 KCNJ4P48050 445 aa20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 C15orf52Q6ZUT6 534 aaKnown RBP20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 EAF2Q96CJ1 260 aaPredicted RBP20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 LTBP3Q9NS15 1303 aa20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 IRS2Q9Y4H2 1338 aa20.88■□□□□ 0.93
PRKCSH-203ENST00000586486 SLC5A1P13866 664 aa20.87■□□□□ 0.93
PRKCSH-203ENST00000586486 SUPT20HQ8NEM7 779 aa20.87■□□□□ 0.93
PRKCSH-203ENST00000586486 WTIPA6NIX2 430 aaPredicted RBP20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 SNAP23O00161 211 aa20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 IFIT1P09914 478 aaKnown RBP20.86■□□□□ 0.93
PRKCSH-203ENST00000586486 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms