RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
VMP1-203ENST00000586245 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
VMP1-203ENST00000586245 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
VMP1-203ENST00000586245 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
VMP1-203ENST00000586245 RWDD1Q9H446 243 aaPredicted RBP16.89■□□□□ 0.29
VMP1-203ENST00000586245 MINPP1Q9UNW1 487 aa16.89■□□□□ 0.29
VMP1-203ENST00000586245 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
VMP1-203ENST00000586245 GRIPAP1Q4V328 841 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 SPEF2Q9C093 1822 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
VMP1-203ENST00000586245 CHRNDQ07001 517 aa16.87■□□□□ 0.29
VMP1-203ENST00000586245 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
VMP1-203ENST00000586245 GPR162Q16538 588 aa16.87■□□□□ 0.29
VMP1-203ENST00000586245 METTL24Q5JXM2 366 aa16.87■□□□□ 0.29
VMP1-203ENST00000586245 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
VMP1-203ENST00000586245 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
VMP1-203ENST00000586245 OLFM4Q6UX06 510 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 DPP8Q6V1X1 898 aaPredicted RBP16.86■□□□□ 0.29
VMP1-203ENST00000586245 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 MPNDQ8N594 471 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 NSFL1CQ9UNZ2 370 aaKnown RBP16.86■□□□□ 0.29
VMP1-203ENST00000586245 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 XDHP47989 1333 aa16.86■□□□□ 0.29
VMP1-203ENST00000586245 GPSM2P81274 684 aa16.85■□□□□ 0.29
VMP1-203ENST00000586245 LRRC37AA6NMS7 1700 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 RAB11FIP3O75154 756 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 KCNJ4P48050 445 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
VMP1-203ENST00000586245 DCTPP1Q9H773 170 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 GGA1Q9UJY5 639 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
VMP1-203ENST00000586245 APBB1O00213 710 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 TAF5LO75529 589 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 PDE8BO95263 885 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.28
VMP1-203ENST00000586245 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
VMP1-203ENST00000586245 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 GRIN3BO60391 1043 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 UFL1O94874 794 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 IGHDP01880 384 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 FKBP4Q02790 459 aaKnown RBP eCLIP16.82■□□□□ 0.28
VMP1-203ENST00000586245 TFCP2Q12800 502 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 PSMD1Q99460 953 aa16.82■□□□□ 0.28
VMP1-203ENST00000586245 SASH1O94885 1247 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 PUM3Q15397 648 aaKnown RBP16.81■□□□□ 0.28
VMP1-203ENST00000586245 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 EYA3Q99504 573 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 TAOK3Q9H2K8 898 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
VMP1-203ENST00000586245 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
VMP1-203ENST00000586245 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 UBE4AQ14139 1066 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
VMP1-203ENST00000586245 LRRCC1Q9C099 1032 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 PPP4R2Q9NY27 417 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 POLLQ9UGP5 575 aa16.8■□□□□ 0.28
VMP1-203ENST00000586245 LTBP3Q9NS15 1303 aa16.79■□□□□ 0.28
VMP1-203ENST00000586245 NFKBIEO00221 500 aa16.79■□□□□ 0.28
VMP1-203ENST00000586245 IFIT1P09914 478 aaKnown RBP16.79■□□□□ 0.28
VMP1-203ENST00000586245 SLC5A1P13866 664 aa16.79■□□□□ 0.28
VMP1-203ENST00000586245 LPIN2Q92539 896 aa16.79■□□□□ 0.28
VMP1-203ENST00000586245 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
VMP1-203ENST00000586245 SNAP23O00161 211 aa16.78■□□□□ 0.28
VMP1-203ENST00000586245 RASSF7Q02833 373 aa16.78■□□□□ 0.28
VMP1-203ENST00000586245 WASHC4Q2M389 1173 aa16.78■□□□□ 0.28
VMP1-203ENST00000586245 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
VMP1-203ENST00000586245 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
VMP1-203ENST00000586245 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
VMP1-203ENST00000586245 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
VMP1-203ENST00000586245 A0A1B0GUL6 1792 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 LTBP1Q14766 1721 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 FGFR2P21802 821 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 TNNI3KQ59H18 835 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 NEUROD6Q96NK8 337 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
VMP1-203ENST00000586245 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
VMP1-203ENST00000586245 ZNF277Q9NRM2 450 aaPredicted RBP16.77■□□□□ 0.28
VMP1-203ENST00000586245 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms