RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 GNAI2P04899 355 aa16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
CHAF1A-202ENST00000585371 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
CHAF1A-202ENST00000585371 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
CHAF1A-202ENST00000585371 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 HTRA3P83110 453 aa16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 BSDC1Q9NW68 430 aaPredicted RBP16.67■□□□□ 0.26
CHAF1A-202ENST00000585371 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 CCDC93Q567U6 631 aa16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 PUS3Q9BZE2 481 aaKnown RBP16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
CHAF1A-202ENST00000585371 POLA2Q14181 598 aa16.65■□□□□ 0.26
CHAF1A-202ENST00000585371 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
CHAF1A-202ENST00000585371 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
CHAF1A-202ENST00000585371 GPSM2P81274 684 aa16.64■□□□□ 0.25
CHAF1A-202ENST00000585371 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
CHAF1A-202ENST00000585371 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
CHAF1A-202ENST00000585371 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.25
CHAF1A-202ENST00000585371 COL4A5P29400 1685 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 POTECB2RU33 542 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 SRGAP3O43295 1099 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
CHAF1A-202ENST00000585371 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 LDHAL6AQ6ZMR3 332 aa16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 PSMD1Q99460 953 aa16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
CHAF1A-202ENST00000585371 CHRNDQ07001 517 aa16.61■□□□□ 0.25
CHAF1A-202ENST00000585371 GRIPAP1Q4V328 841 aa16.61■□□□□ 0.25
CHAF1A-202ENST00000585371 MPNDQ8N594 471 aa16.61■□□□□ 0.25
CHAF1A-202ENST00000585371 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
CHAF1A-202ENST00000585371 POLLQ9UGP5 575 aa16.61■□□□□ 0.25
CHAF1A-202ENST00000585371 EYA2O00167 538 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 RPAP2Q8IXW5 612 aaPredicted RBP16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 NSFL1CQ9UNZ2 370 aaKnown RBP16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 SCN4AP35499 1836 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
CHAF1A-202ENST00000585371 SNAP23O00161 211 aa16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 CIAO1O76071 339 aa16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 XDHP47989 1333 aa16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 ZNF646O15015 1829 aaPredicted RBP16.59■□□□□ 0.25
CHAF1A-202ENST00000585371 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 TAF5LO75529 589 aa16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 ZNF277Q9NRM2 450 aaPredicted RBP16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 ARAP2Q8WZ64 1704 aa16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 PSME4Q14997 1843 aa16.58■□□□□ 0.24
CHAF1A-202ENST00000585371 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
CHAF1A-202ENST00000585371 DDNO94850 711 aaPredicted RBP16.57■□□□□ 0.24
CHAF1A-202ENST00000585371 GPR101Q96P66 508 aaPredicted RBP16.57■□□□□ 0.24
CHAF1A-202ENST00000585371 ANKRD2Q9GZV1 360 aa16.57■□□□□ 0.24
CHAF1A-202ENST00000585371 SIL1Q9H173 461 aa16.57■□□□□ 0.24
CHAF1A-202ENST00000585371 MROH5Q6ZUA9 1318 aa16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 GGA1Q9UJY5 639 aa16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
CHAF1A-202ENST00000585371 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms