RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 C8orf58Q8NAV2 365 aa19.36■□□□□ 0.69
VAPA-209ENST00000585042 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
VAPA-209ENST00000585042 MYD88Q99836 296 aa19.36■□□□□ 0.69
VAPA-209ENST00000585042 DBNDD1Q9H9R9 158 aa19.36■□□□□ 0.69
VAPA-209ENST00000585042 CWC25Q9NXE8 425 aaPredicted RBP19.36■□□□□ 0.69
VAPA-209ENST00000585042 RIMBP2O15034 1052 aa19.35■□□□□ 0.69
VAPA-209ENST00000585042 CA12O43570 354 aa19.35■□□□□ 0.69
VAPA-209ENST00000585042 ECE2O60344 883 aa19.35■□□□□ 0.69
VAPA-209ENST00000585042 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
VAPA-209ENST00000585042 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
VAPA-209ENST00000585042 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
VAPA-209ENST00000585042 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
VAPA-209ENST00000585042 ANKIB1Q9P2G1 1089 aa19.33■□□□□ 0.68
VAPA-209ENST00000585042 GGA1Q9UJY5 639 aa19.33■□□□□ 0.68
VAPA-209ENST00000585042 G3V3G9 751 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 BRPF1P55201 1214 aaPredicted RBP19.32■□□□□ 0.68
VAPA-209ENST00000585042 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 KSR2Q6VAB6 950 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 SAMD7Q7Z3H4 446 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
VAPA-209ENST00000585042 SHTN1A0MZ66 631 aa19.31■□□□□ 0.68
VAPA-209ENST00000585042 GRM1Q13255 1194 aa19.31■□□□□ 0.68
VAPA-209ENST00000585042 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
VAPA-209ENST00000585042 DCPSQ96C86 337 aaKnown RBP19.31■□□□□ 0.68
VAPA-209ENST00000585042 KCNQ5Q9NR82 932 aa19.31■□□□□ 0.68
VAPA-209ENST00000585042 RTL9Q8NET4 1388 aa19.31■□□□□ 0.68
VAPA-209ENST00000585042 UFL1O94874 794 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 NOGQ13253 232 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 TBC1D10BQ4KMP7 808 aaPredicted RBP19.3■□□□□ 0.68
VAPA-209ENST00000585042 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 AGBL3Q8NEM8 1001 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
VAPA-209ENST00000585042 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 ZNF609O15014 1411 aa19.3■□□□□ 0.68
VAPA-209ENST00000585042 XDHP47989 1333 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 PI4KAP2A4QPH2 592 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 AOC2O75106 756 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 ATP2B4P23634 1241 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 PI4KAP1Q8N8J0 262 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 COL4A1P02462 1669 aa19.29■□□□□ 0.68
VAPA-209ENST00000585042 IL16Q14005 1332 aa19.28■□□□□ 0.68
VAPA-209ENST00000585042 PODNQ7Z5L7 613 aa19.28■□□□□ 0.68
VAPA-209ENST00000585042 C2orf69Q8N8R5 385 aa19.28■□□□□ 0.68
VAPA-209ENST00000585042 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 CTSWP56202 376 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 HUNKP57058 714 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
VAPA-209ENST00000585042 KIF4BQ2VIQ3 1234 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 RSBN1LQ6PCB5 846 aaPredicted RBP19.27■□□□□ 0.68
VAPA-209ENST00000585042 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 TTLL11Q8NHH1 800 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 ABHD8Q96I13 439 aa19.27■□□□□ 0.68
VAPA-209ENST00000585042 BSDC1Q9NW68 430 aaPredicted RBP19.27■□□□□ 0.68
VAPA-209ENST00000585042 EGFRP00533 1210 aa19.26■□□□□ 0.67
VAPA-209ENST00000585042 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
VAPA-209ENST00000585042 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
VAPA-209ENST00000585042 GBA2Q9HCG7 927 aaPredicted RBP19.26■□□□□ 0.67
VAPA-209ENST00000585042 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
VAPA-209ENST00000585042 H7C1W4 665 aa19.25■□□□□ 0.67
VAPA-209ENST00000585042 MMP14P50281 582 aa19.25■□□□□ 0.67
VAPA-209ENST00000585042 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
VAPA-209ENST00000585042 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
VAPA-209ENST00000585042 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
VAPA-209ENST00000585042 JARID2Q92833 1246 aaPredicted RBP19.25■□□□□ 0.67
VAPA-209ENST00000585042 GMLQ99445 158 aa19.25■□□□□ 0.67
VAPA-209ENST00000585042 USP17L3A6NCW0 530 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 USP17L4A6NCW7 530 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 USP17L1Q7RTZ2 530 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
VAPA-209ENST00000585042 MINPP1Q9UNW1 487 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 SCN9AQ15858 1988 aa19.24■□□□□ 0.67
VAPA-209ENST00000585042 NEURL1BA8MQ27 555 aa19.23■□□□□ 0.67
VAPA-209ENST00000585042 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
VAPA-209ENST00000585042 USP17L8P0C7I0 530 aa19.22■□□□□ 0.67
VAPA-209ENST00000585042 PLA2G12BQ9BX93 195 aa19.22■□□□□ 0.67
VAPA-209ENST00000585042 GGA3Q9NZ52 723 aa19.22■□□□□ 0.67
VAPA-209ENST00000585042 LEMD3Q9Y2U8 911 aa19.22■□□□□ 0.67
VAPA-209ENST00000585042 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
VAPA-209ENST00000585042 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 PSME4Q14997 1843 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 FAM155AB1AL88 458 aaPredicted RBP19.21■□□□□ 0.67
VAPA-209ENST00000585042 ADM5C9JUS6 153 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 FKBP1BP68106 108 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 SCARF1Q14162 830 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 CWF19L2Q2TBE0 894 aaKnown RBP19.21■□□□□ 0.67
VAPA-209ENST00000585042 CCDC184Q52MB2 194 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
VAPA-209ENST00000585042 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 GREM2Q9H772 168 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 MYOZ2Q9NPC6 264 aa19.21■□□□□ 0.67
VAPA-209ENST00000585042 MYH3P11055 1940 aa19.2■□□□□ 0.66
VAPA-209ENST00000585042 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
VAPA-209ENST00000585042 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
VAPA-209ENST00000585042 GCKRQ14397 625 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms