RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 SIL1Q9H173 461 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
ERBB2-216ENST00000584014 ANKIB1Q9P2G1 1089 aa10.42□□□□□ -0.74
ERBB2-216ENST00000584014 NSFL1CQ9UNZ2 370 aaKnown RBP10.42□□□□□ -0.74
ERBB2-216ENST00000584014 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
ERBB2-216ENST00000584014 C6orf229H3BNL8 230 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 SRGAP3O43295 1099 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 GRIN3BO60391 1043 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 RASSF7Q02833 373 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 CCDC93Q567U6 631 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 LDHAL6AQ6ZMR3 332 aa10.41□□□□□ -0.74
ERBB2-216ENST00000584014 HELBQ8NG08 1087 aaPredicted RBP10.41□□□□□ -0.74
ERBB2-216ENST00000584014 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
ERBB2-216ENST00000584014 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
ERBB2-216ENST00000584014 KCNJ4P48050 445 aa10.4□□□□□ -0.74
ERBB2-216ENST00000584014 OS9Q13438 667 aaPredicted RBP10.4□□□□□ -0.74
ERBB2-216ENST00000584014 DPP8Q6V1X1 898 aaPredicted RBP10.4□□□□□ -0.74
ERBB2-216ENST00000584014 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
ERBB2-216ENST00000584014 MPNDQ8N594 471 aa10.4□□□□□ -0.74
ERBB2-216ENST00000584014 PA2G4Q9UQ80 394 aaKnown RBP10.4□□□□□ -0.74
ERBB2-216ENST00000584014 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.74
ERBB2-216ENST00000584014 COL4A1P02462 1669 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 G3V3G9 751 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 APBB1O00213 710 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 TAF5LO75529 589 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 GPSM2P81274 684 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 RABL6Q3YEC7 729 aaPredicted RBP10.39□□□□□ -0.75
ERBB2-216ENST00000584014 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 SOGA3Q5TF21 947 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 EXOC6Q8TAG9 804 aa10.39□□□□□ -0.75
ERBB2-216ENST00000584014 GPR101Q96P66 508 aaPredicted RBP10.39□□□□□ -0.75
ERBB2-216ENST00000584014 PUS3Q9BZE2 481 aaKnown RBP10.39□□□□□ -0.75
ERBB2-216ENST00000584014 ARFGEF1Q9Y6D6 1849 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 UFL1O94874 794 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 NEFLP07196 543 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 LRRC24Q50LG9 513 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 METTL24Q5JXM2 366 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 TMC4Q7Z404 712 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 RTKN2Q8IZC4 609 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-216ENST00000584014 ZBTB40Q9NUA8 1239 aa10.38□□□□□ -0.75
ERBB2-216ENST00000584014 SURF6O75683 361 aaKnown RBP10.37□□□□□ -0.75
ERBB2-216ENST00000584014 ATP8B2P98198 1209 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 CHRNDQ07001 517 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
ERBB2-216ENST00000584014 CCDC88AQ3V6T2 1871 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 CC2D2BQ6DHV5 1058 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 CEP85Q6P2H3 762 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 BSDC1Q9NW68 430 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-216ENST00000584014 RNF181Q9P0P0 153 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 MINPP1Q9UNW1 487 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 RTL9Q8NET4 1388 aa10.37□□□□□ -0.75
ERBB2-216ENST00000584014 WTIPA6NIX2 430 aaPredicted RBP10.36□□□□□ -0.75
ERBB2-216ENST00000584014 SNAP23O00161 211 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 NFKBIEO00221 500 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 PPIP5K2O43314 1243 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
ERBB2-216ENST00000584014 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 ANKRD2Q9GZV1 360 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
ERBB2-216ENST00000584014 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
ERBB2-216ENST00000584014 XDHP47989 1333 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 EYA2O00167 538 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 HMMRO75330 724 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 RFX5P48382 616 aaPredicted RBP10.35□□□□□ -0.75
ERBB2-216ENST00000584014 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
ERBB2-216ENST00000584014 AOC3Q16853 763 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 POTEHQ6S545 545 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 SUPT20HQ8NEM7 779 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 ZC3H12CQ9C0D7 883 aaKnown RBP10.35□□□□□ -0.75
ERBB2-216ENST00000584014 POLLQ9UGP5 575 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
ERBB2-216ENST00000584014 LMNB1P20700 586 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
ERBB2-216ENST00000584014 RPAP2Q8IXW5 612 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-216ENST00000584014 TBC1D16Q8TBP0 767 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-216ENST00000584014 JDP2Q8WYK2 163 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 NEUROD6Q96NK8 337 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 EYA3Q99504 573 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 FER1L6Q2WGJ9 1857 aa10.34□□□□□ -0.75
ERBB2-216ENST00000584014 ZNF804BA4D1E1 1349 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 IL15P40933 162 aaPredicted RBP10.33□□□□□ -0.76
ERBB2-216ENST00000584014 TFCP2Q12800 502 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 MTX1Q13505 466 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 POLA2Q14181 598 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 ATG9AQ7Z3C6 839 aa10.33□□□□□ -0.76
ERBB2-216ENST00000584014 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms