RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 TTC41PQ6P2S7 1318 aa11.33□□□□□ -0.6
CASC3-209ENST00000583902 LRP5O75197 1615 aa11.32□□□□□ -0.6
CASC3-209ENST00000583902 ERC2O15083 957 aa11.32□□□□□ -0.6
CASC3-209ENST00000583902 DDR1Q08345 913 aa11.32□□□□□ -0.6
CASC3-209ENST00000583902 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
CASC3-209ENST00000583902 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
CASC3-209ENST00000583902 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
CASC3-209ENST00000583902 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
CASC3-209ENST00000583902 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
CASC3-209ENST00000583902 NPR1P16066 1061 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 RPS8P62241 208 aaKnown RBP11.31□□□□□ -0.6
CASC3-209ENST00000583902 GRAPQ13588 217 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
CASC3-209ENST00000583902 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
CASC3-209ENST00000583902 CNNM1Q9NRU3 951 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 STAP2Q9UGK3 403 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
CASC3-209ENST00000583902 IGSF3O75054 1194 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 SYNE4Q8N205 404 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 LNPKQ9C0E8 428 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 TMX4Q9H1E5 349 aaPredicted RBP11.3□□□□□ -0.6
CASC3-209ENST00000583902 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
CASC3-209ENST00000583902 SASH1O94885 1247 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 PDE8BO95263 885 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 MX1P20591 662 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
CASC3-209ENST00000583902 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
CASC3-209ENST00000583902 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
CASC3-209ENST00000583902 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 H0YIN7 160 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 GLRX3O76003 335 aaKnown RBP11.28□□□□□ -0.6
CASC3-209ENST00000583902 SRGNP10124 158 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 PDE1AP54750 535 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 TGFB2P61812 414 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
CASC3-209ENST00000583902 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 PLEKHM2Q8IWE5 1019 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 LPIN2Q92539 896 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
CASC3-209ENST00000583902 SIL1Q9H173 461 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
CASC3-209ENST00000583902 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
CASC3-209ENST00000583902 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
CASC3-209ENST00000583902 AACSQ86V21 672 aa11.27□□□□□ -0.61
CASC3-209ENST00000583902 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
CASC3-209ENST00000583902 ECHDC1Q9NTX5 307 aa11.27□□□□□ -0.61
CASC3-209ENST00000583902 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
CASC3-209ENST00000583902 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
CASC3-209ENST00000583902 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 SLC5A1P13866 664 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 TFCP2Q12800 502 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 LRRFIP1Q32MZ4 808 aaKnown RBP11.26□□□□□ -0.61
CASC3-209ENST00000583902 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 SOGA3Q5TF21 947 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
CASC3-209ENST00000583902 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
CASC3-209ENST00000583902 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 ZNF609O15014 1411 aa11.26□□□□□ -0.61
CASC3-209ENST00000583902 APBB1O00213 710 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 UQCRFS1P1P0C7P4 283 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 ATP5JP18859 108 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 RGS3P49796 1198 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 CHRNDQ07001 517 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
CASC3-209ENST00000583902 KLHDC4Q8TBB5 520 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 EAF2Q96CJ1 260 aaPredicted RBP11.25□□□□□ -0.61
CASC3-209ENST00000583902 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
CASC3-209ENST00000583902 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 XDHP47989 1333 aa11.25□□□□□ -0.61
CASC3-209ENST00000583902 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 A0A1B0GUL6 1792 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 SEMA3EO15041 775 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 FGFR2P21802 821 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 PDE4AP27815 886 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 R3HDM1Q15032 1099 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms