RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
CCDC57-218ENST00000583593 PODXL2Q9NZ53 605 aa17.49■□□□□ 0.39
CCDC57-218ENST00000583593 CA12O43570 354 aa17.48■□□□□ 0.39
CCDC57-218ENST00000583593 RPS12P25398 132 aaKnown RBP17.48■□□□□ 0.39
CCDC57-218ENST00000583593 HUNKP57058 714 aa17.48■□□□□ 0.39
CCDC57-218ENST00000583593 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
CCDC57-218ENST00000583593 KRT26Q7Z3Y9 468 aa17.48■□□□□ 0.39
CCDC57-218ENST00000583593 EYA3Q99504 573 aa17.48■□□□□ 0.39
CCDC57-218ENST00000583593 MYD88Q99836 296 aa17.48■□□□□ 0.39
CCDC57-218ENST00000583593 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-218ENST00000583593 ADM5C9JUS6 153 aa17.47■□□□□ 0.39
CCDC57-218ENST00000583593 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-218ENST00000583593 VIL1P09327 827 aaKnown RBP17.47■□□□□ 0.39
CCDC57-218ENST00000583593 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
CCDC57-218ENST00000583593 JARID2Q92833 1246 aaPredicted RBP17.47■□□□□ 0.39
CCDC57-218ENST00000583593 ZC3H12CQ9C0D7 883 aaKnown RBP17.47■□□□□ 0.39
CCDC57-218ENST00000583593 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
CCDC57-218ENST00000583593 CCDC85CA6NKD9 419 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 APAF1O14727 1248 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 NOGQ13253 232 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
CCDC57-218ENST00000583593 PSME4Q14997 1843 aa17.46■□□□□ 0.39
CCDC57-218ENST00000583593 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.38
CCDC57-218ENST00000583593 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
CCDC57-218ENST00000583593 RGS19P49795 217 aa17.45■□□□□ 0.38
CCDC57-218ENST00000583593 KIF4BQ2VIQ3 1234 aa17.45■□□□□ 0.38
CCDC57-218ENST00000583593 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
CCDC57-218ENST00000583593 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
CCDC57-218ENST00000583593 MCOLN1Q9GZU1 580 aa17.45■□□□□ 0.38
CCDC57-218ENST00000583593 GBA2Q9HCG7 927 aaPredicted RBP17.45■□□□□ 0.38
CCDC57-218ENST00000583593 UFL1O94874 794 aa17.44■□□□□ 0.38
CCDC57-218ENST00000583593 GNAI1P63096 354 aa17.44■□□□□ 0.38
CCDC57-218ENST00000583593 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
CCDC57-218ENST00000583593 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
CCDC57-218ENST00000583593 PDE8AO60658 829 aa17.43■□□□□ 0.38
CCDC57-218ENST00000583593 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
CCDC57-218ENST00000583593 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
CCDC57-218ENST00000583593 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
CCDC57-218ENST00000583593 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
CCDC57-218ENST00000583593 ZNF609O15014 1411 aa17.43■□□□□ 0.38
CCDC57-218ENST00000583593 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-218ENST00000583593 ZNF280AP59817 542 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-218ENST00000583593 CCDC152Q4G0S7 254 aa17.42■□□□□ 0.38
CCDC57-218ENST00000583593 RSBN1LQ6PCB5 846 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-218ENST00000583593 CWC25Q9NXE8 425 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-218ENST00000583593 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
CCDC57-218ENST00000583593 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
CCDC57-218ENST00000583593 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
CCDC57-218ENST00000583593 TSPYL6Q8N831 410 aa17.41■□□□□ 0.38
CCDC57-218ENST00000583593 GMLQ99445 158 aa17.41■□□□□ 0.38
CCDC57-218ENST00000583593 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
CCDC57-218ENST00000583593 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 DGKZQ13574 1117 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
CCDC57-218ENST00000583593 G3V3G9 751 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-218ENST00000583593 MLLT1Q03111 559 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-218ENST00000583593 CALD1Q05682 793 aaKnown RBP17.39■□□□□ 0.37
CCDC57-218ENST00000583593 SCARF1Q14162 830 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
CCDC57-218ENST00000583593 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 XDHP47989 1333 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 TNRC18O15417 2968 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-218ENST00000583593 MYH3P11055 1940 aa17.39■□□□□ 0.37
CCDC57-218ENST00000583593 SPEF2Q9C093 1822 aa17.38■□□□□ 0.37
CCDC57-218ENST00000583593 SLC10A3P09131 477 aa17.38■□□□□ 0.37
CCDC57-218ENST00000583593 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
CCDC57-218ENST00000583593 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
CCDC57-218ENST00000583593 AKAP11Q9UKA4 1901 aa17.38■□□□□ 0.37
CCDC57-218ENST00000583593 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
CCDC57-218ENST00000583593 CTSWP56202 376 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 PODNQ7Z5L7 613 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 MYOZ2Q9NPC6 264 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
CCDC57-218ENST00000583593 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 GREM2Q9H772 168 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
CCDC57-218ENST00000583593 SCAF8Q9UPN6 1271 aaKnown RBP17.36■□□□□ 0.37
CCDC57-218ENST00000583593 TRPA1O75762 1119 aa17.35■□□□□ 0.37
CCDC57-218ENST00000583593 CWF19L2Q2TBE0 894 aaKnown RBP17.35■□□□□ 0.37
CCDC57-218ENST00000583593 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
CCDC57-218ENST00000583593 MXD3Q9BW11 206 aa17.35■□□□□ 0.37
CCDC57-218ENST00000583593 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
CCDC57-218ENST00000583593 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms