RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 F6X3S4 739 aa31.59■■■□□ 2.65
TSEN54-209ENST00000583454 DEFB115Q30KQ5 88 aa31.59■■■□□ 2.65
TSEN54-209ENST00000583454 CST9Q5W186 159 aa31.59■■■□□ 2.65
TSEN54-209ENST00000583454 PGAP2Q9UHJ9 254 aa31.59■■■□□ 2.65
TSEN54-209ENST00000583454 NSFL1CQ9UNZ2 370 aaKnown RBP31.59■■■□□ 2.65
TSEN54-209ENST00000583454 MYH3P11055 1940 aa31.59■■■□□ 2.65
TSEN54-209ENST00000583454 PCCAP05165 728 aaPredicted RBP31.58■■■□□ 2.65
TSEN54-209ENST00000583454 HIRAP54198 1017 aaPredicted RBP31.58■■■□□ 2.65
TSEN54-209ENST00000583454 TNIP1Q15025 636 aa31.58■■■□□ 2.65
TSEN54-209ENST00000583454 CWF19L2Q2TBE0 894 aaKnown RBP31.58■■■□□ 2.65
TSEN54-209ENST00000583454 LINS1Q8NG48 757 aa31.58■■■□□ 2.65
TSEN54-209ENST00000583454 SEC31BQ9NQW1 1179 aa31.58■■■□□ 2.65
TSEN54-209ENST00000583454 SHTN1A0MZ66 631 aa31.57■■■□□ 2.64
TSEN54-209ENST00000583454 BRPF1P55201 1214 aaPredicted RBP31.57■■■□□ 2.64
TSEN54-209ENST00000583454 RPS8P62241 208 aaKnown RBP31.57■■■□□ 2.64
TSEN54-209ENST00000583454 BCL2L13Q9BXK5 485 aa31.57■■■□□ 2.64
TSEN54-209ENST00000583454 PTPRCP08575 1304 aa31.56■■■□□ 2.64
TSEN54-209ENST00000583454 RARSP54136 660 aaKnown RBP31.56■■■□□ 2.64
TSEN54-209ENST00000583454 WASHC4Q2M389 1173 aa31.56■■■□□ 2.64
TSEN54-209ENST00000583454 TRPM4Q8TD43 1214 aa31.56■■■□□ 2.64
TSEN54-209ENST00000583454 SMC4Q9NTJ3 1288 aa31.56■■■□□ 2.64
TSEN54-209ENST00000583454 WBP1LQ9NX94 342 aa31.56■■■□□ 2.64
TSEN54-209ENST00000583454 ABT1Q9ULW3 272 aaKnown RBP31.56■■■□□ 2.64
TSEN54-209ENST00000583454 PSME4Q14997 1843 aa31.55■■■□□ 2.64
TSEN54-209ENST00000583454 BEND3Q5T5X7 828 aa31.55■■■□□ 2.64
TSEN54-209ENST00000583454 DBNDD1Q9H9R9 158 aa31.55■■■□□ 2.64
TSEN54-209ENST00000583454 WDR33Q9C0J8 1336 aaKnown RBP31.54■■■□□ 2.64
TSEN54-209ENST00000583454 TBC1D16Q8TBP0 767 aa31.54■■■□□ 2.64
TSEN54-209ENST00000583454 JARID2Q92833 1246 aaPredicted RBP31.54■■■□□ 2.64
TSEN54-209ENST00000583454 GPR101Q96P66 508 aaPredicted RBP31.54■■■□□ 2.64
TSEN54-209ENST00000583454 GCKRQ14397 625 aa31.53■■■□□ 2.64
TSEN54-209ENST00000583454 CNOT7Q9UIV1 285 aaKnown RBP31.53■■■□□ 2.64
TSEN54-209ENST00000583454 POLR2AP24928 1970 aaKnown RBP31.53■■■□□ 2.64
TSEN54-209ENST00000583454 SPEF2Q9C093 1822 aa31.53■■■□□ 2.64
TSEN54-209ENST00000583454 RTL9Q8NET4 1388 aa31.53■■■□□ 2.64
TSEN54-209ENST00000583454 C6orf229H3BNL8 230 aa31.52■■■□□ 2.64
TSEN54-209ENST00000583454 PSMD14O00487 310 aa31.52■■■□□ 2.64
TSEN54-209ENST00000583454 RIMBP2O15034 1052 aa31.52■■■□□ 2.64
TSEN54-209ENST00000583454 HSP90B1P14625 803 aaKnown RBP31.52■■■□□ 2.64
TSEN54-209ENST00000583454 GLIS2Q9BZE0 524 aaPredicted RBP31.52■■■□□ 2.64
TSEN54-209ENST00000583454 PODXL2Q9NZ53 605 aa31.52■■■□□ 2.64
TSEN54-209ENST00000583454 ZBTB12Q9Y330 459 aaPredicted RBP31.52■■■□□ 2.64
TSEN54-209ENST00000583454 H7C1W4 665 aa31.51■■■□□ 2.63
TSEN54-209ENST00000583454 PDE8AO60658 829 aa31.51■■■□□ 2.63
TSEN54-209ENST00000583454 ZC3H15Q8WU90 426 aaKnown RBP31.51■■■□□ 2.63
TSEN54-209ENST00000583454 KCNQ5Q9NR82 932 aa31.51■■■□□ 2.63
TSEN54-209ENST00000583454 DPF2Q92785 391 aa31.5■■■□□ 2.63
TSEN54-209ENST00000583454 TLL2Q9Y6L7 1015 aa31.5■■■□□ 2.63
TSEN54-209ENST00000583454 ECE2O60344 883 aa31.49■■■□□ 2.63
TSEN54-209ENST00000583454 MICALL2Q8IY33 904 aa31.49■■■□□ 2.63
TSEN54-209ENST00000583454 PRDM10Q9NQV6 1147 aa31.49■■■□□ 2.63
TSEN54-209ENST00000583454 DOK7Q18PE1 504 aa31.48■■■□□ 2.63
TSEN54-209ENST00000583454 CCDC152Q4G0S7 254 aa31.48■■■□□ 2.63
TSEN54-209ENST00000583454 EYA3Q99504 573 aa31.48■■■□□ 2.63
TSEN54-209ENST00000583454 ALDH1L1O75891 902 aa31.47■■■□□ 2.63
TSEN54-209ENST00000583454 CTCFP49711 727 aaPredicted RBP31.47■■■□□ 2.63
TSEN54-209ENST00000583454 CASP7P55210 303 aa31.47■■■□□ 2.63
TSEN54-209ENST00000583454 SLC4A10Q6U841 1118 aa31.47■■■□□ 2.63
TSEN54-209ENST00000583454 CAPNS2Q96L46 248 aa31.47■■■□□ 2.63
TSEN54-209ENST00000583454 CCDC85AQ96PX6 553 aaPredicted RBP31.47■■■□□ 2.63
TSEN54-209ENST00000583454 EGFRP00533 1210 aa31.46■■■□□ 2.63
TSEN54-209ENST00000583454 CYP4F22Q6NT55 531 aa31.46■■■□□ 2.63
TSEN54-209ENST00000583454 AIDAQ96BJ3 306 aa31.46■■■□□ 2.63
TSEN54-209ENST00000583454 SRCIN1Q9C0H9 1055 aa31.46■■■□□ 2.63
TSEN54-209ENST00000583454 NOB1Q9ULX3 412 aaKnown RBP31.46■■■□□ 2.63
TSEN54-209ENST00000583454 ZNF646O15015 1829 aaPredicted RBP31.46■■■□□ 2.63
TSEN54-209ENST00000583454 CAPN15O75808 1086 aa31.45■■■□□ 2.63
TSEN54-209ENST00000583454 UBE3BQ7Z3V4 1068 aa31.45■■■□□ 2.63
TSEN54-209ENST00000583454 H7C1D1 291 aa31.44■■■□□ 2.62
TSEN54-209ENST00000583454 UFL1O94874 794 aa31.44■■■□□ 2.62
TSEN54-209ENST00000583454 CELF2O95319 508 aaKnown RBP31.44■■■□□ 2.62
TSEN54-209ENST00000583454 SAMD7Q7Z3H4 446 aa31.44■■■□□ 2.62
TSEN54-209ENST00000583454 SAPCD2Q86UD0 394 aa31.44■■■□□ 2.62
TSEN54-209ENST00000583454 RPS12P25398 132 aaKnown RBP31.43■■■□□ 2.62
TSEN54-209ENST00000583454 ZNF609O15014 1411 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 HSPA8P11142 646 aaKnown RBP31.42■■■□□ 2.62
TSEN54-209ENST00000583454 CTSWP56202 376 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 CDC37L1Q7L3B6 337 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 ARHGAP45Q92619 1136 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 PLA2G12BQ9BX93 195 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 ZC3H12CQ9C0D7 883 aaKnown RBP31.42■■■□□ 2.62
TSEN54-209ENST00000583454 GGA1Q9UJY5 639 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 KIF16BQ96L93 1317 aa31.42■■■□□ 2.62
TSEN54-209ENST00000583454 ECE1P42892 770 aa31.41■■■□□ 2.62
TSEN54-209ENST00000583454 LBX1P52954 281 aa31.41■■■□□ 2.62
TSEN54-209ENST00000583454 MAP2K1Q02750 393 aaPredicted RBP31.41■■■□□ 2.62
TSEN54-209ENST00000583454 TTLL11Q8NHH1 800 aa31.41■■■□□ 2.62
TSEN54-209ENST00000583454 ANKIB1Q9P2G1 1089 aa31.41■■■□□ 2.62
TSEN54-209ENST00000583454 BCAR3O75815 825 aa31.4■■■□□ 2.62
TSEN54-209ENST00000583454 VIL1P09327 827 aaKnown RBP31.4■■■□□ 2.62
TSEN54-209ENST00000583454 TBC1D10BQ4KMP7 808 aaPredicted RBP31.4■■■□□ 2.62
TSEN54-209ENST00000583454 DLK2Q6UY11 383 aa31.4■■■□□ 2.62
TSEN54-209ENST00000583454 API5Q9BZZ5 524 aaKnown RBP31.4■■■□□ 2.62
TSEN54-209ENST00000583454 GRM8O00222 908 aa31.39■■■□□ 2.62
TSEN54-209ENST00000583454 ANKRD18AQ8IVF6 992 aa31.39■■■□□ 2.62
TSEN54-209ENST00000583454 XDHP47989 1333 aa31.39■■■□□ 2.62
TSEN54-209ENST00000583454 PAXIP1Q6ZW49 1069 aaPredicted RBP31.38■■■□□ 2.61
TSEN54-209ENST00000583454 HHIPL1Q96JK4 782 aa31.38■■■□□ 2.61
TSEN54-209ENST00000583454 WTIPA6NIX2 430 aaPredicted RBP31.37■■■□□ 2.61
TSEN54-209ENST00000583454 AOC2O75106 756 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms