RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 SSH1Q8WYL5 1049 aa10.28□□□□□ -0.76
KPNB1-213ENST00000583013 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
KPNB1-213ENST00000583013 PLA2G12BQ9BX93 195 aa10.28□□□□□ -0.76
KPNB1-213ENST00000583013 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-213ENST00000583013 TMX4Q9H1E5 349 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-213ENST00000583013 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
KPNB1-213ENST00000583013 ALDH1L1O75891 902 aa10.27□□□□□ -0.77
KPNB1-213ENST00000583013 POTEIP0CG38 1075 aa10.27□□□□□ -0.77
KPNB1-213ENST00000583013 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.77
KPNB1-213ENST00000583013 JARID2Q92833 1246 aaPredicted RBP10.27□□□□□ -0.77
KPNB1-213ENST00000583013 VPS33BQ9H267 617 aa10.27□□□□□ -0.77
KPNB1-213ENST00000583013 NMRK2Q9NPI5 230 aa10.27□□□□□ -0.77
KPNB1-213ENST00000583013 SCN4AP35499 1836 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 FZD9O00144 591 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-213ENST00000583013 C1QTNF8P60827 252 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 RPS8P62241 208 aaKnown RBP10.26□□□□□ -0.77
KPNB1-213ENST00000583013 DPY19L2Q6NUT2 758 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 DPP8Q6V1X1 898 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-213ENST00000583013 SUPT20HQ8NEM7 779 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 TTLL11Q8NHH1 800 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 TRPC6Q9Y210 931 aa10.26□□□□□ -0.77
KPNB1-213ENST00000583013 GRM8O00222 908 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 MPNDQ8N594 471 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 JDP2Q8WYK2 163 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 SRCIN1Q9C0H9 1055 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 GREM2Q9H772 168 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 SEC31BQ9NQW1 1179 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 SMC4Q9NTJ3 1288 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 PCDHB8Q9UN66 801 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 ZBED9Q6R2W3 1325 aa10.25□□□□□ -0.77
KPNB1-213ENST00000583013 A0A1B0GUL6 1792 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 PPIP5K2O43314 1243 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 TOMM70O94826 608 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 CSF1RP07333 972 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-213ENST00000583013 KIAA2012Q0VF49 1180 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-213ENST00000583013 CCDC85AQ96PX6 553 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-213ENST00000583013 CDC5LQ99459 802 aaKnown RBP10.24□□□□□ -0.77
KPNB1-213ENST00000583013 BCL2L13Q9BXK5 485 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 UTYO14607 1347 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 ZNF541Q9H0D2 1346 aa10.24□□□□□ -0.77
KPNB1-213ENST00000583013 POTECB2RU33 542 aa10.23□□□□□ -0.77
KPNB1-213ENST00000583013 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
KPNB1-213ENST00000583013 RARSP54136 660 aaKnown RBP10.23□□□□□ -0.77
KPNB1-213ENST00000583013 FOXO4P98177 505 aa10.23□□□□□ -0.77
KPNB1-213ENST00000583013 AOC3Q16853 763 aa10.23□□□□□ -0.77
KPNB1-213ENST00000583013 ANKRD18AQ8IVF6 992 aa10.23□□□□□ -0.77
KPNB1-213ENST00000583013 NIM1KQ8IY84 436 aa10.23□□□□□ -0.77
KPNB1-213ENST00000583013 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
KPNB1-213ENST00000583013 ADAMTSL1Q8N6G6 1762 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 ITGA6P23229 1130 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 GPSM2P81274 684 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
KPNB1-213ENST00000583013 GPC2Q8N158 579 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 BSDC1Q9NW68 430 aaPredicted RBP10.22□□□□□ -0.77
KPNB1-213ENST00000583013 C9orf78Q9NZ63 289 aaPredicted RBP10.22□□□□□ -0.77
KPNB1-213ENST00000583013 POLLQ9UGP5 575 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 NSFL1CQ9UNZ2 370 aaKnown RBP10.22□□□□□ -0.77
KPNB1-213ENST00000583013 KIF16BQ96L93 1317 aa10.22□□□□□ -0.77
KPNB1-213ENST00000583013 PSME4Q14997 1843 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 EIF6P56537 245 aaKnown RBP10.21□□□□□ -0.77
KPNB1-213ENST00000583013 C16orf71Q8IYS4 520 aaPredicted RBP10.21□□□□□ -0.77
KPNB1-213ENST00000583013 TBC1D16Q8TBP0 767 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 EYA3Q99504 573 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 API5Q9BZZ5 524 aaKnown RBP10.21□□□□□ -0.77
KPNB1-213ENST00000583013 ZNRF3Q9ULT6 936 aa10.21□□□□□ -0.77
KPNB1-213ENST00000583013 XDHP47989 1333 aa10.21□□□□□ -0.78
KPNB1-213ENST00000583013 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 ATMINO43313 823 aaPredicted RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 UFL1O94874 794 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 NBPF7P0C2Y1 421 aaPredicted RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 TIE1P35590 1138 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 CCT4P50991 539 aaKnown RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 FSTL1Q12841 308 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 WASHC4Q2M389 1173 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 EPHA10Q5JZY3 1008 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 LMBR1LQ6UX01 489 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 KAZALD1Q96I82 304 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 SUCLG2Q96I99 432 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 ANKIB1Q9P2G1 1089 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 NOB1Q9ULX3 412 aaKnown RBP10.2□□□□□ -0.78
KPNB1-213ENST00000583013 MINPP1Q9UNW1 487 aa10.2□□□□□ -0.78
KPNB1-213ENST00000583013 ZNF646O15015 1829 aaPredicted RBP10.19□□□□□ -0.78
KPNB1-213ENST00000583013 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
KPNB1-213ENST00000583013 ANKRD18BA2A2Z9 1011 aa10.19□□□□□ -0.78
KPNB1-213ENST00000583013 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
KPNB1-213ENST00000583013 ATP2B4P23634 1241 aa10.19□□□□□ -0.78
KPNB1-213ENST00000583013 CXCL9Q07325 125 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms