RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
RNF43-206ENST00000582293 KLHDC4Q8TBB5 520 aa20.59■□□□□ 0.89
RNF43-206ENST00000582293 NSFL1CQ9UNZ2 370 aaKnown RBP20.59■□□□□ 0.89
RNF43-206ENST00000582293 MVPQ14764 893 aaKnown RBP20.58■□□□□ 0.89
RNF43-206ENST00000582293 TBC1D16Q8TBP0 767 aa20.58■□□□□ 0.89
RNF43-206ENST00000582293 PUS3Q9BZE2 481 aaKnown RBP20.58■□□□□ 0.89
RNF43-206ENST00000582293 COG6Q9Y2V7 657 aa20.58■□□□□ 0.89
RNF43-206ENST00000582293 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
RNF43-206ENST00000582293 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
RNF43-206ENST00000582293 GPR101Q96P66 508 aaPredicted RBP20.57■□□□□ 0.88
RNF43-206ENST00000582293 GNAI2P04899 355 aa20.56■□□□□ 0.88
RNF43-206ENST00000582293 MS4A1P11836 297 aa20.56■□□□□ 0.88
RNF43-206ENST00000582293 PTPN12Q05209 780 aaKnown RBP20.56■□□□□ 0.88
RNF43-206ENST00000582293 MTX1Q13505 466 aa20.56■□□□□ 0.88
RNF43-206ENST00000582293 MPHOSPH8Q99549 860 aa20.56■□□□□ 0.88
RNF43-206ENST00000582293 TMX4Q9H1E5 349 aaPredicted RBP20.56■□□□□ 0.88
RNF43-206ENST00000582293 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
RNF43-206ENST00000582293 CHRNDQ07001 517 aa20.55■□□□□ 0.88
RNF43-206ENST00000582293 AOC3Q16853 763 aa20.55■□□□□ 0.88
RNF43-206ENST00000582293 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
RNF43-206ENST00000582293 XDHP47989 1333 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 KIAA2012Q0VF49 1180 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 LRRC24Q50LG9 513 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 LDHAL6AQ6ZMR3 332 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
RNF43-206ENST00000582293 SUPT20HQ8NEM7 779 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
RNF43-206ENST00000582293 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
RNF43-206ENST00000582293 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 SNAP23O00161 211 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 UFL1O94874 794 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
RNF43-206ENST00000582293 VPS33BQ9H267 617 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
RNF43-206ENST00000582293 C6orf229H3BNL8 230 aa20.52■□□□□ 0.88
RNF43-206ENST00000582293 FZD9O00144 591 aa20.52■□□□□ 0.88
RNF43-206ENST00000582293 TAF5LO75529 589 aa20.52■□□□□ 0.88
RNF43-206ENST00000582293 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
RNF43-206ENST00000582293 ZNF541Q9H0D2 1346 aa20.52■□□□□ 0.87
RNF43-206ENST00000582293 ATP2B4P23634 1241 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 KLRK1P26718 216 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 LARGE2Q8N3Y3 721 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 VGLL2Q8N8G2 317 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 ZNF784Q8NCA9 323 aaPredicted RBP20.51■□□□□ 0.87
RNF43-206ENST00000582293 ANKRD2Q9GZV1 360 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
RNF43-206ENST00000582293 PA2G4Q9UQ80 394 aaKnown RBP20.51■□□□□ 0.87
RNF43-206ENST00000582293 RIMBP2O15034 1052 aa20.5■□□□□ 0.87
RNF43-206ENST00000582293 SRGAP3O43295 1099 aa20.5■□□□□ 0.87
RNF43-206ENST00000582293 TXNRD3Q86VQ6 643 aa20.5■□□□□ 0.87
RNF43-206ENST00000582293 COPRSQ9NQ92 184 aa20.5■□□□□ 0.87
RNF43-206ENST00000582293 CNNM1Q9NRU3 951 aa20.5■□□□□ 0.87
RNF43-206ENST00000582293 YDJCA8MPS7 323 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 EYA2O00167 538 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 ATP8B2P98198 1209 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 POLA2Q14181 598 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 ZNF804BA4D1E1 1349 aa20.49■□□□□ 0.87
RNF43-206ENST00000582293 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
RNF43-206ENST00000582293 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
RNF43-206ENST00000582293 EYA3Q99504 573 aa20.48■□□□□ 0.87
RNF43-206ENST00000582293 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 SSH3Q8TE77 659 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
RNF43-206ENST00000582293 SIL1Q9H173 461 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 DBNDD1Q9H9R9 158 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 MROH5Q6ZUA9 1318 aa20.47■□□□□ 0.87
RNF43-206ENST00000582293 CIAO1O76071 339 aa20.46■□□□□ 0.87
RNF43-206ENST00000582293 DDNO94850 711 aaPredicted RBP20.46■□□□□ 0.87
RNF43-206ENST00000582293 DOK7Q18PE1 504 aa20.46■□□□□ 0.87
RNF43-206ENST00000582293 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
RNF43-206ENST00000582293 ZC3H12CQ9C0D7 883 aaKnown RBP20.46■□□□□ 0.87
RNF43-206ENST00000582293 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
RNF43-206ENST00000582293 SCN9AQ15858 1988 aa20.46■□□□□ 0.87
RNF43-206ENST00000582293 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
RNF43-206ENST00000582293 WDR90Q96KV7 1748 aa20.45■□□□□ 0.86
RNF43-206ENST00000582293 POTECB2RU33 542 aa20.45■□□□□ 0.86
RNF43-206ENST00000582293 C15orf52Q6ZUT6 534 aaKnown RBP20.45■□□□□ 0.86
RNF43-206ENST00000582293 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
RNF43-206ENST00000582293 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
RNF43-206ENST00000582293 FBXO3Q9UK99 471 aa20.45■□□□□ 0.86
RNF43-206ENST00000582293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.45■□□□□ 0.86
RNF43-206ENST00000582293 ECE2O60344 883 aa20.44■□□□□ 0.86
RNF43-206ENST00000582293 PDE8BO95263 885 aa20.44■□□□□ 0.86
RNF43-206ENST00000582293 CXCL9Q07325 125 aa20.44■□□□□ 0.86
RNF43-206ENST00000582293 METTL24Q5JXM2 366 aa20.44■□□□□ 0.86
RNF43-206ENST00000582293 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
RNF43-206ENST00000582293 FGFR2P21802 821 aa20.43■□□□□ 0.86
RNF43-206ENST00000582293 CRBNQ96SW2 442 aa20.43■□□□□ 0.86
RNF43-206ENST00000582293 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
RNF43-206ENST00000582293 UBE4AQ14139 1066 aa20.42■□□□□ 0.86
RNF43-206ENST00000582293 PSME4Q14997 1843 aa20.41■□□□□ 0.86
RNF43-206ENST00000582293 RAD17O75943 681 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms