RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 GPSM2P81274 684 aa16.6■□□□□ 0.25
CSNK1D-218ENST00000581655 MOB2Q70IA6 237 aa16.6■□□□□ 0.25
CSNK1D-218ENST00000581655 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-218ENST00000581655 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-218ENST00000581655 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-218ENST00000581655 SCARF1Q14162 830 aa16.59■□□□□ 0.25
CSNK1D-218ENST00000581655 EYA3Q99504 573 aa16.59■□□□□ 0.25
CSNK1D-218ENST00000581655 KIAA0100Q14667 2235 aaKnown RBP16.58■□□□□ 0.25
CSNK1D-218ENST00000581655 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 NEFMP07197 916 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 TCIRG1Q13488 830 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 COL4A1P02462 1669 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 HTTP42858 3142 aa16.58■□□□□ 0.24
CSNK1D-218ENST00000581655 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-218ENST00000581655 TBC1D16Q8TBP0 767 aa16.57■□□□□ 0.24
CSNK1D-218ENST00000581655 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
CSNK1D-218ENST00000581655 SCAF8Q9UPN6 1271 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-218ENST00000581655 FKTNO75072 461 aa16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 TM4SF4P48230 202 aa16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 ZNF280AP59817 542 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 NECTIN2Q92692 538 aa16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 ZC3H12CQ9C0D7 883 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
CSNK1D-218ENST00000581655 G3V3G9 751 aa16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 DCAF8Q5TAQ9 597 aa16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 R3HDMLQ9H3Y0 253 aa16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 CENPFP49454 3210 aa16.55■□□□□ 0.24
CSNK1D-218ENST00000581655 PITPNM2Q9BZ72 1349 aa16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 AGBL3Q8NEM8 1001 aa16.54■□□□□ 0.24
CSNK1D-218ENST00000581655 ZNF609O15014 1411 aa16.53■□□□□ 0.24
CSNK1D-218ENST00000581655 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
CSNK1D-218ENST00000581655 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
CSNK1D-218ENST00000581655 PSME4Q14997 1843 aa16.53■□□□□ 0.24
CSNK1D-218ENST00000581655 UFL1O94874 794 aa16.52■□□□□ 0.24
CSNK1D-218ENST00000581655 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
CSNK1D-218ENST00000581655 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
CSNK1D-218ENST00000581655 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
CSNK1D-218ENST00000581655 CFHR5Q9BXR6 569 aa16.52■□□□□ 0.24
CSNK1D-218ENST00000581655 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 RTL5Q5HYW3 569 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 GMLQ99445 158 aa16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 TRIM17Q9Y577 477 aa16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 CEP290O15078 2479 aa16.51■□□□□ 0.23
CSNK1D-218ENST00000581655 INTS3Q68E01 1043 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-218ENST00000581655 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
CSNK1D-218ENST00000581655 TRIOBPQ9H2D6 2365 aa16.5■□□□□ 0.23
CSNK1D-218ENST00000581655 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 ISCA1Q9BUE6 129 aa16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 GGA1Q9UJY5 639 aa16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 BRCA2P51587 3418 aa16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-218ENST00000581655 NF2P35240 595 aa16.48■□□□□ 0.23
CSNK1D-218ENST00000581655 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-218ENST00000581655 OTOP1Q7RTM1 612 aa16.48■□□□□ 0.23
CSNK1D-218ENST00000581655 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
CSNK1D-218ENST00000581655 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-218ENST00000581655 PRKG1Q13976 671 aa16.47■□□□□ 0.23
CSNK1D-218ENST00000581655 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
CSNK1D-218ENST00000581655 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
CSNK1D-218ENST00000581655 USP17L3A6NCW0 530 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 USP17L4A6NCW7 530 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 USP17L1Q7RTZ2 530 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
CSNK1D-218ENST00000581655 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
CSNK1D-218ENST00000581655 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
CSNK1D-218ENST00000581655 ARMC9Q7Z3E5 817 aa16.45■□□□□ 0.22
CSNK1D-218ENST00000581655 CCER1Q8TC90 406 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-218ENST00000581655 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-218ENST00000581655 WNT10BO00744 389 aa16.44■□□□□ 0.22
CSNK1D-218ENST00000581655 PODNQ7Z5L7 613 aa16.44■□□□□ 0.22
CSNK1D-218ENST00000581655 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
CSNK1D-218ENST00000581655 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 IFNL1Q8IU54 200 aa16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 MXD3Q9BW11 206 aa16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
CSNK1D-218ENST00000581655 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 MANSC4A6NHS7 340 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 SASH1O94885 1247 aa16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 RIPK4P57078 832 aa16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 OGFOD1Q8N543 542 aa16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 FZD1Q9UP38 647 aa16.42■□□□□ 0.22
CSNK1D-218ENST00000581655 XDHP47989 1333 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms